Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.62□□□□□ -0.39
SPCS3P61009 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.62□□□□□ -0.39
SPCS3P61009 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SPCS3P61009 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.61□□□□□ -0.39
SPCS3P61009 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SPCS3P61009 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SPCS3P61009 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 AC136604.1-201ENST00000418535 575 ntBASIC12.61□□□□□ -0.39
SPCS3P61009 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SPCS3P61009 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.61□□□□□ -0.39
SPCS3P61009 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.61□□□□□ -0.39
SPCS3P61009 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.61□□□□□ -0.39
SPCS3P61009 SLC25A6P4-201ENST00000586535 553 ntBASIC12.61□□□□□ -0.39
SPCS3P61009 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.61□□□□□ -0.39
SPCS3P61009 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 AL513190.1-201ENST00000621254 727 ntBASIC12.61□□□□□ -0.39
SPCS3P61009 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.61□□□□□ -0.39
SPCS3P61009 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.61□□□□□ -0.39
SPCS3P61009 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.61□□□□□ -0.39
SPCS3P61009 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.61□□□□□ -0.39
SPCS3P61009 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.61□□□□□ -0.39
SPCS3P61009 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 HLA-A-201ENST00000376802 1334 ntBASIC12.61□□□□□ -0.39
SPCS3P61009 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SPCS3P61009 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.6□□□□□ -0.39
SPCS3P61009 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SPCS3P61009 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 AJ011931.1-201ENST00000618749 2492 ntBASIC12.6□□□□□ -0.39
SPCS3P61009 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.6□□□□□ -0.39
SPCS3P61009 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SPCS3P61009 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 MIR346-201ENST00000362234 95 ntBASIC12.6□□□□□ -0.39
SPCS3P61009 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.6□□□□□ -0.39
SPCS3P61009 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.6□□□□□ -0.39
SPCS3P61009 RNA5SP416-201ENST00000516838 111 ntBASIC12.6□□□□□ -0.39
SPCS3P61009 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SPCS3P61009 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.6□□□□□ -0.39
SPCS3P61009 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.6□□□□□ -0.39
SPCS3P61009 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.6□□□□□ -0.39
SPCS3P61009 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.6□□□□□ -0.39
SPCS3P61009 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.6□□□□□ -0.39
SPCS3P61009 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
SPCS3P61009 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.6□□□□□ -0.39
SPCS3P61009 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SPCS3P61009 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms