Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC074044.1-201ENST00000609673 707 ntBASIC13.58□□□□□ -0.24
CX3CR1P49238 AF228730.6-201ENST00000641497 218 ntBASIC13.58□□□□□ -0.24
CX3CR1P49238 AC084121.3-201ENST00000641716 218 ntBASIC13.58□□□□□ -0.24
CX3CR1P49238 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CR1P49238 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.58□□□□□ -0.24
CX3CR1P49238 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CR1P49238 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CR1P49238 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CR1P49238 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CX3CR1P49238 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CR1P49238 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CR1P49238 ZBED1P1-201ENST00000502364 1930 ntBASIC13.58□□□□□ -0.24
CX3CR1P49238 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CR1P49238 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CR1P49238 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CR1P49238 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.58□□□□□ -0.24
CX3CR1P49238 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CX3CR1P49238 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.58□□□□□ -0.24
CX3CR1P49238 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CR1P49238 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CR1P49238 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CX3CR1P49238 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CX3CR1P49238 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CX3CR1P49238 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.58□□□□□ -0.24
CX3CR1P49238 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.57□□□□□ -0.24
CX3CR1P49238 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CX3CR1P49238 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.57□□□□□ -0.24
CX3CR1P49238 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CX3CR1P49238 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.57□□□□□ -0.24
CX3CR1P49238 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
CX3CR1P49238 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.57□□□□□ -0.24
CX3CR1P49238 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
CX3CR1P49238 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CX3CR1P49238 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CX3CR1P49238 AL133267.1-201ENST00000398220 340 ntBASIC13.57□□□□□ -0.24
CX3CR1P49238 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.57□□□□□ -0.24
CX3CR1P49238 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.57□□□□□ -0.24
CX3CR1P49238 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.57□□□□□ -0.24
CX3CR1P49238 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.57□□□□□ -0.24
CX3CR1P49238 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CX3CR1P49238 AC010336.2-201ENST00000564226 506 ntBASIC13.57□□□□□ -0.24
CX3CR1P49238 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.57□□□□□ -0.24
CX3CR1P49238 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.57□□□□□ -0.24
CX3CR1P49238 LINC01115-203ENST00000606068 577 ntBASIC13.57□□□□□ -0.24
CX3CR1P49238 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
CX3CR1P49238 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CX3CR1P49238 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.57□□□□□ -0.24
CX3CR1P49238 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.57□□□□□ -0.24
CX3CR1P49238 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.57□□□□□ -0.24
CX3CR1P49238 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CX3CR1P49238 AC067750.1-201ENST00000608826 6545 ntBASIC13.57□□□□□ -0.24
CX3CR1P49238 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.57□□□□□ -0.24
CX3CR1P49238 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CX3CR1P49238 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CX3CR1P49238 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.56□□□□□ -0.24
CX3CR1P49238 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
CX3CR1P49238 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CX3CR1P49238 AL359258.3-201ENST00000622910 2331 ntBASIC13.56□□□□□ -0.24
CX3CR1P49238 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CX3CR1P49238 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CX3CR1P49238 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms