Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HOXC12P31275 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
HOXC12P31275 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HOXC12P31275 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.71□□□□□ -0.22
HOXC12P31275 KRT8P44-201ENST00000441609 1350 ntBASIC13.71□□□□□ -0.22
HOXC12P31275 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HOXC12P31275 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HOXC12P31275 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HOXC12P31275 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
HOXC12P31275 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 AL121723.1-201ENST00000445194 1519 ntBASIC13.7□□□□□ -0.22
HOXC12P31275 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.7□□□□□ -0.22
HOXC12P31275 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
HOXC12P31275 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.7□□□□□ -0.22
HOXC12P31275 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HOXC12P31275 ANKRD19P-201ENST00000338192 862 ntBASIC13.7□□□□□ -0.22
HOXC12P31275 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
HOXC12P31275 AC092933.1-201ENST00000393644 945 ntBASIC13.7□□□□□ -0.22
HOXC12P31275 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.7□□□□□ -0.22
HOXC12P31275 CROCCP4-201ENST00000457096 498 ntBASIC13.7□□□□□ -0.22
HOXC12P31275 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.7□□□□□ -0.22
HOXC12P31275 RN7SL399P-201ENST00000471648 279 ntBASIC13.7□□□□□ -0.22
HOXC12P31275 FAM86LP-201ENST00000478302 853 ntBASIC13.7□□□□□ -0.22
HOXC12P31275 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.7□□□□□ -0.22
HOXC12P31275 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.7□□□□□ -0.22
HOXC12P31275 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.7□□□□□ -0.22
HOXC12P31275 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.7□□□□□ -0.22
HOXC12P31275 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.7□□□□□ -0.22
HOXC12P31275 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.7□□□□□ -0.22
HOXC12P31275 MIR6869-201ENST00000619434 62 ntBASIC13.7□□□□□ -0.22
HOXC12P31275 GPR182-203ENST00000622922 591 ntBASIC13.7□□□□□ -0.22
HOXC12P31275 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
HOXC12P31275 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
HOXC12P31275 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
HOXC12P31275 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HOXC12P31275 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HOXC12P31275 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HOXC12P31275 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
HOXC12P31275 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC12P31275 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
HOXC12P31275 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.69□□□□□ -0.22
HOXC12P31275 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.69□□□□□ -0.22
HOXC12P31275 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HOXC12P31275 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HOXC12P31275 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
HOXC12P31275 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
HOXC12P31275 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HOXC12P31275 KRT43P-201ENST00000434019 910 ntBASIC13.69□□□□□ -0.22
HOXC12P31275 KRT18P64-201ENST00000434946 1219 ntBASIC13.69□□□□□ -0.22
HOXC12P31275 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
HOXC12P31275 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HOXC12P31275 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.69□□□□□ -0.22
HOXC12P31275 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.69□□□□□ -0.22
HOXC12P31275 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HOXC12P31275 AL583810.1-201ENST00000553344 1045 ntBASIC13.69□□□□□ -0.22
HOXC12P31275 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.69□□□□□ -0.22
HOXC12P31275 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXC12P31275 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms