Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.83■□□□□ 0.12
TOP3BO95985 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TOP3BO95985 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.83■□□□□ 0.12
TOP3BO95985 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.83■□□□□ 0.12
TOP3BO95985 TPRX2P-201ENST00000535362 881 ntBASIC15.83■□□□□ 0.12
TOP3BO95985 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.83■□□□□ 0.12
TOP3BO95985 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.83■□□□□ 0.12
TOP3BO95985 SRD5A3P1-201ENST00000603021 949 ntBASIC15.83■□□□□ 0.12
TOP3BO95985 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.83■□□□□ 0.12
TOP3BO95985 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TOP3BO95985 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 AC093525.8-201ENST00000624099 1342 ntBASIC15.83■□□□□ 0.12
TOP3BO95985 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.83■□□□□ 0.12
TOP3BO95985 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TOP3BO95985 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.83■□□□□ 0.12
TOP3BO95985 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TOP3BO95985 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.83■□□□□ 0.12
TOP3BO95985 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.83■□□□□ 0.12
TOP3BO95985 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.83■□□□□ 0.12
TOP3BO95985 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.83■□□□□ 0.12
TOP3BO95985 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TOP3BO95985 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TOP3BO95985 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TOP3BO95985 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 AGAP7P-201ENST00000582299 2062 ntBASIC15.82■□□□□ 0.12
TOP3BO95985 AGAP14-201ENST00000624701 2060 ntBASIC15.82■□□□□ 0.12
TOP3BO95985 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 BRWD1P1-201ENST00000401091 371 ntBASIC15.82■□□□□ 0.12
TOP3BO95985 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.82■□□□□ 0.12
TOP3BO95985 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.82■□□□□ 0.12
TOP3BO95985 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.82■□□□□ 0.12
TOP3BO95985 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 AC103810.3-201ENST00000583567 96 ntBASIC15.82■□□□□ 0.12
TOP3BO95985 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.82■□□□□ 0.12
TOP3BO95985 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.82■□□□□ 0.12
TOP3BO95985 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.82■□□□□ 0.12
TOP3BO95985 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TOP3BO95985 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TOP3BO95985 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.82■□□□□ 0.12
TOP3BO95985 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TOP3BO95985 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TOP3BO95985 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.81■□□□□ 0.12
TOP3BO95985 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TOP3BO95985 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TOP3BO95985 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.81■□□□□ 0.12
TOP3BO95985 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TOP3BO95985 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
TOP3BO95985 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.81■□□□□ 0.12
TOP3BO95985 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TOP3BO95985 AC108725.1-201ENST00000495472 409 ntBASIC15.81■□□□□ 0.12
TOP3BO95985 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms