Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 XBP1P1-201ENST00000436573 652 ntBASIC17.12■□□□□ 0.33
LOC285556D6RIA3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 PHBP15-201ENST00000574228 665 ntBASIC17.12■□□□□ 0.33
LOC285556D6RIA3 MIR3188-201ENST00000583494 85 ntBASIC17.12■□□□□ 0.33
LOC285556D6RIA3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.12■□□□□ 0.33
LOC285556D6RIA3 AC103691.2-201ENST00000618824 433 ntBASIC17.12■□□□□ 0.33
LOC285556D6RIA3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LOC285556D6RIA3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 AC144522.1-201ENST00000625111 1658 ntBASIC17.11■□□□□ 0.33
LOC285556D6RIA3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 AP000358.1-201ENST00000456260 156 ntBASIC17.11■□□□□ 0.33
LOC285556D6RIA3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 IGHV3-37-201ENST00000518544 340 ntBASIC17.11■□□□□ 0.33
LOC285556D6RIA3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 AC092299.1-201ENST00000632679 757 ntBASIC17.11■□□□□ 0.33
LOC285556D6RIA3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 SALL4P5-201ENST00000419001 1760 ntBASIC17.11■□□□□ 0.33
LOC285556D6RIA3 C18orf15-201ENST00000623680 2534 ntBASIC17.11■□□□□ 0.33
LOC285556D6RIA3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LOC285556D6RIA3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 AL022334.2-201ENST00000610000 484 ntBASIC17.1■□□□□ 0.33
LOC285556D6RIA3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 AC015909.3-201ENST00000572855 1794 ntBASIC17.1■□□□□ 0.33
LOC285556D6RIA3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 FAM90A2P-201ENST00000511144 1395 ntBASIC17.1■□□□□ 0.33
LOC285556D6RIA3 FAM90A25P-201ENST00000528404 1395 ntBASIC17.1■□□□□ 0.33
LOC285556D6RIA3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LOC285556D6RIA3 AC135983.4-201ENST00000564116 1262 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms