Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HCFC1P51610 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 PPT1-215ENST00000641471 2368 ntBASIC13.31□□□□□ -0.28
HCFC1P51610 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
HCFC1P51610 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.31□□□□□ -0.28
HCFC1P51610 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HCFC1P51610 TUBBP5-203ENST00000508529 1334 ntBASIC13.3□□□□□ -0.28
HCFC1P51610 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.3□□□□□ -0.28
HCFC1P51610 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.3□□□□□ -0.28
HCFC1P51610 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.3□□□□□ -0.28
HCFC1P51610 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.3□□□□□ -0.28
HCFC1P51610 NUP210P1-202ENST00000504322 710 ntBASIC13.3□□□□□ -0.28
HCFC1P51610 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.3□□□□□ -0.28
HCFC1P51610 COX5BP1-201ENST00000507622 393 ntBASIC13.3□□□□□ -0.28
HCFC1P51610 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.3□□□□□ -0.28
HCFC1P51610 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.3□□□□□ -0.28
HCFC1P51610 AF254983.2-201ENST00000612331 135 ntBASIC13.3□□□□□ -0.28
HCFC1P51610 AC022748.3-201ENST00000621828 275 ntBASIC13.3□□□□□ -0.28
HCFC1P51610 AP001002.3-201ENST00000623482 206 ntBASIC13.3□□□□□ -0.28
HCFC1P51610 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.3□□□□□ -0.28
HCFC1P51610 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.3□□□□□ -0.28
HCFC1P51610 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
HCFC1P51610 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
HCFC1P51610 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 AC007787.1-201ENST00000588095 1583 ntBASIC13.3□□□□□ -0.28
HCFC1P51610 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.3□□□□□ -0.28
HCFC1P51610 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
HCFC1P51610 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.3□□□□□ -0.28
HCFC1P51610 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.3□□□□□ -0.28
HCFC1P51610 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HCFC1P51610 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HCFC1P51610 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.3□□□□□ -0.28
HCFC1P51610 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.3□□□□□ -0.28
HCFC1P51610 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.3□□□□□ -0.28
HCFC1P51610 AC134698.3-201ENST00000523880 214 ntBASIC13.3□□□□□ -0.28
HCFC1P51610 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.3□□□□□ -0.28
HCFC1P51610 DUX4L47-201ENST00000566374 394 ntBASIC13.3□□□□□ -0.28
HCFC1P51610 AC025181.2-201ENST00000606994 802 ntBASIC13.3□□□□□ -0.28
HCFC1P51610 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.3□□□□□ -0.28
HCFC1P51610 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.3□□□□□ -0.28
HCFC1P51610 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
HCFC1P51610 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.3□□□□□ -0.28
HCFC1P51610 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.3□□□□□ -0.28
HCFC1P51610 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HCFC1P51610 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HCFC1P51610 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
HCFC1P51610 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.29□□□□□ -0.28
HCFC1P51610 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HCFC1P51610 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.29□□□□□ -0.28
HCFC1P51610 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.29□□□□□ -0.28
HCFC1P51610 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.29□□□□□ -0.28
HCFC1P51610 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.29□□□□□ -0.28
HCFC1P51610 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
HCFC1P51610 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.29□□□□□ -0.28
HCFC1P51610 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.29□□□□□ -0.28
HCFC1P51610 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.29□□□□□ -0.28
HCFC1P51610 AC128714.1-201ENST00000637035 887 ntBASIC13.29□□□□□ -0.28
HCFC1P51610 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.29□□□□□ -0.28
HCFC1P51610 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HCFC1P51610 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.29□□□□□ -0.28
HCFC1P51610 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HCFC1P51610 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HCFC1P51610 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.29□□□□□ -0.28
HCFC1P51610 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.29□□□□□ -0.28
HCFC1P51610 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HCFC1P51610 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms