Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
MSR1P21757 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
MSR1P21757 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
MSR1P21757 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.65□□□□□ -0.22
MSR1P21757 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.65□□□□□ -0.22
MSR1P21757 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.65□□□□□ -0.22
MSR1P21757 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.65□□□□□ -0.22
MSR1P21757 FAM8A3P-201ENST00000427218 844 ntBASIC13.65□□□□□ -0.22
MSR1P21757 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
MSR1P21757 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
MSR1P21757 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.65□□□□□ -0.22
MSR1P21757 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.65□□□□□ -0.22
MSR1P21757 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.65□□□□□ -0.22
MSR1P21757 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.65□□□□□ -0.22
MSR1P21757 AC008738.7-201ENST00000609744 511 ntBASIC13.65□□□□□ -0.22
MSR1P21757 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.65□□□□□ -0.22
MSR1P21757 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
MSR1P21757 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.65□□□□□ -0.22
MSR1P21757 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
MSR1P21757 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.65□□□□□ -0.22
MSR1P21757 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.65□□□□□ -0.22
MSR1P21757 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.65□□□□□ -0.22
MSR1P21757 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MSR1P21757 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
MSR1P21757 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.64□□□□□ -0.23
MSR1P21757 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
MSR1P21757 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.64□□□□□ -0.23
MSR1P21757 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
MSR1P21757 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.64□□□□□ -0.23
MSR1P21757 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
MSR1P21757 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
MSR1P21757 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.64□□□□□ -0.23
MSR1P21757 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.64□□□□□ -0.23
MSR1P21757 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 AGAP7P-201ENST00000582299 2062 ntBASIC13.64□□□□□ -0.23
MSR1P21757 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 AGAP14-201ENST00000624701 2060 ntBASIC13.64□□□□□ -0.23
MSR1P21757 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.64□□□□□ -0.23
MSR1P21757 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
MSR1P21757 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.64□□□□□ -0.23
MSR1P21757 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
MSR1P21757 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.64□□□□□ -0.23
MSR1P21757 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.64□□□□□ -0.23
MSR1P21757 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.64□□□□□ -0.23
MSR1P21757 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.64□□□□□ -0.23
MSR1P21757 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.64□□□□□ -0.23
MSR1P21757 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.64□□□□□ -0.23
MSR1P21757 SRD5A3P1-201ENST00000603021 949 ntBASIC13.64□□□□□ -0.23
MSR1P21757 AL390955.2-201ENST00000603032 514 ntBASIC13.64□□□□□ -0.23
MSR1P21757 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.64□□□□□ -0.23
MSR1P21757 AL158212.4-201ENST00000624062 1286 ntBASIC13.64□□□□□ -0.23
MSR1P21757 AC004840.1-201ENST00000636359 365 ntBASIC13.64□□□□□ -0.23
MSR1P21757 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.64□□□□□ -0.23
MSR1P21757 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
MSR1P21757 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MSR1P21757 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
MSR1P21757 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
MSR1P21757 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
MSR1P21757 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.64□□□□□ -0.23
MSR1P21757 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.64□□□□□ -0.23
MSR1P21757 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms