Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
UBL4AP11441 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.34□□□□□ -0.11
UBL4AP11441 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
UBL4AP11441 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBL4AP11441 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
UBL4AP11441 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
UBL4AP11441 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.34□□□□□ -0.11
UBL4AP11441 BASP1P1-201ENST00000430708 665 ntBASIC14.34□□□□□ -0.11
UBL4AP11441 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.34□□□□□ -0.11
UBL4AP11441 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.34□□□□□ -0.11
UBL4AP11441 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
UBL4AP11441 AC009477.1-201ENST00000452936 217 ntBASIC14.34□□□□□ -0.11
UBL4AP11441 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
UBL4AP11441 AC093214.1-201ENST00000511688 1107 ntBASIC14.34□□□□□ -0.11
UBL4AP11441 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.34□□□□□ -0.11
UBL4AP11441 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
UBL4AP11441 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.34□□□□□ -0.11
UBL4AP11441 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.34□□□□□ -0.11
UBL4AP11441 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBL4AP11441 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.34□□□□□ -0.11
UBL4AP11441 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.34□□□□□ -0.11
UBL4AP11441 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.34□□□□□ -0.11
UBL4AP11441 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.34□□□□□ -0.11
UBL4AP11441 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
UBL4AP11441 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
UBL4AP11441 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBL4AP11441 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UBL4AP11441 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UBL4AP11441 AL109954.1-202ENST00000564051 2148 ntBASIC14.33□□□□□ -0.11
UBL4AP11441 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBL4AP11441 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.33□□□□□ -0.11
UBL4AP11441 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.33□□□□□ -0.11
UBL4AP11441 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
UBL4AP11441 PCDHA3-202ENST00000532566 4594 ntBASIC14.33□□□□□ -0.11
UBL4AP11441 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBL4AP11441 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 BTBD7P1-201ENST00000447253 1453 ntBASIC14.33□□□□□ -0.12
UBL4AP11441 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UBL4AP11441 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
UBL4AP11441 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.33□□□□□ -0.12
UBL4AP11441 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
UBL4AP11441 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
UBL4AP11441 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.33□□□□□ -0.12
UBL4AP11441 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.33□□□□□ -0.12
UBL4AP11441 RPL5P21-201ENST00000404620 815 ntBASIC14.33□□□□□ -0.12
UBL4AP11441 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.33□□□□□ -0.12
UBL4AP11441 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.33□□□□□ -0.12
UBL4AP11441 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
UBL4AP11441 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.33□□□□□ -0.12
UBL4AP11441 TIMM17BP1-201ENST00000545713 516 ntBASIC14.33□□□□□ -0.12
UBL4AP11441 AC015910.1-201ENST00000579400 975 ntBASIC14.33□□□□□ -0.12
UBL4AP11441 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.33□□□□□ -0.12
UBL4AP11441 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
UBL4AP11441 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 AC084364.1-201ENST00000551967 1556 ntBASIC14.33□□□□□ -0.12
UBL4AP11441 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
UBL4AP11441 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.33□□□□□ -0.12
UBL4AP11441 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBL4AP11441 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBL4AP11441 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBL4AP11441 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.32□□□□□ -0.12
UBL4AP11441 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
UBL4AP11441 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
UBL4AP11441 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBL4AP11441 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.32□□□□□ -0.12
UBL4AP11441 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.32□□□□□ -0.12
UBL4AP11441 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
UBL4AP11441 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBL4AP11441 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.32□□□□□ -0.12
UBL4AP11441 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBL4AP11441 AC022144.1-201ENST00000602255 1580 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms