Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.6□□□□□ -0.23
NPIPB4C9JG80 FAM207CP-201ENST00000443486 507 ntBASIC13.6□□□□□ -0.23
NPIPB4C9JG80 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.6□□□□□ -0.23
NPIPB4C9JG80 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 AC104596.2-201ENST00000512793 793 ntBASIC13.6□□□□□ -0.23
NPIPB4C9JG80 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 AJ011932.1-201ENST00000621707 465 ntBASIC13.6□□□□□ -0.23
NPIPB4C9JG80 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPB4C9JG80 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 AC232323.1-201ENST00000540724 2099 ntBASIC13.59□□□□□ -0.23
NPIPB4C9JG80 REXO1L5P-201ENST00000622260 2098 ntBASIC13.59□□□□□ -0.23
NPIPB4C9JG80 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 AC134915.1-201ENST00000426461 574 ntBASIC13.59□□□□□ -0.23
NPIPB4C9JG80 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 BX539320.1-201ENST00000623759 877 ntBASIC13.59□□□□□ -0.23
NPIPB4C9JG80 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPB4C9JG80 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPB4C9JG80 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPB4C9JG80 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPB4C9JG80 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPB4C9JG80 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.58□□□□□ -0.23
NPIPB4C9JG80 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPB4C9JG80 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPB4C9JG80 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPB4C9JG80 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPB4C9JG80 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPB4C9JG80 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
NPIPB4C9JG80 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 KRT8P14-201ENST00000414254 1442 ntBASIC13.58□□□□□ -0.24
NPIPB4C9JG80 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 AL139094.1-201ENST00000405549 1188 ntBASIC13.58□□□□□ -0.24
NPIPB4C9JG80 AC087499.6-201ENST00000411576 835 ntBASIC13.58□□□□□ -0.24
NPIPB4C9JG80 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 AC124283.3-201ENST00000570869 594 ntBASIC13.58□□□□□ -0.24
NPIPB4C9JG80 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
NPIPB4C9JG80 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms