Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 AC124283.3-201ENST00000570869 594 ntBASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 PRAL-201ENST00000624952 3286 ntBASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSBP3Q9BWW4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 OR8S1-201ENST00000310194 1080 ntBASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSBP3Q9BWW4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms