Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.97□□□□□ -0.33
LMO1P25800 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.97□□□□□ -0.33
LMO1P25800 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 MEIS3P1-201ENST00000495167 958 ntBASIC12.97□□□□□ -0.33
LMO1P25800 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.97□□□□□ -0.33
LMO1P25800 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.97□□□□□ -0.33
LMO1P25800 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.97□□□□□ -0.33
LMO1P25800 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.97□□□□□ -0.33
LMO1P25800 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.97□□□□□ -0.33
LMO1P25800 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LMO1P25800 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LMO1P25800 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.97□□□□□ -0.33
LMO1P25800 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO1P25800 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.96□□□□□ -0.33
LMO1P25800 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LMO1P25800 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.96□□□□□ -0.33
LMO1P25800 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.96□□□□□ -0.33
LMO1P25800 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
LMO1P25800 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.96□□□□□ -0.33
LMO1P25800 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.96□□□□□ -0.33
LMO1P25800 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.96□□□□□ -0.33
LMO1P25800 FAM8A3P-201ENST00000427218 844 ntBASIC12.96□□□□□ -0.33
LMO1P25800 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.96□□□□□ -0.33
LMO1P25800 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.96□□□□□ -0.33
LMO1P25800 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.96□□□□□ -0.33
LMO1P25800 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LMO1P25800 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.96□□□□□ -0.33
LMO1P25800 AC004890.2-204ENST00000481968 304 ntBASIC12.96□□□□□ -0.33
LMO1P25800 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.96□□□□□ -0.33
LMO1P25800 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.96□□□□□ -0.33
LMO1P25800 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.96□□□□□ -0.33
LMO1P25800 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.96□□□□□ -0.33
LMO1P25800 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.96□□□□□ -0.33
LMO1P25800 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO1P25800 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
LMO1P25800 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LMO1P25800 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
LMO1P25800 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.96□□□□□ -0.34
LMO1P25800 AC012508.2-201ENST00000567613 1472 ntBASIC12.96□□□□□ -0.34
LMO1P25800 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LMO1P25800 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.96□□□□□ -0.34
LMO1P25800 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.34
LMO1P25800 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
LMO1P25800 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LMO1P25800 FGD5P1-202ENST00000614866 2498 ntBASIC12.96□□□□□ -0.34
LMO1P25800 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.96□□□□□ -0.34
LMO1P25800 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LMO1P25800 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LMO1P25800 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LMO1P25800 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
LMO1P25800 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO1P25800 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LMO1P25800 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO1P25800 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LMO1P25800 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO1P25800 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LMO1P25800 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.95□□□□□ -0.34
LMO1P25800 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LMO1P25800 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LMO1P25800 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO1P25800 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms