Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN2P17655 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN2P17655 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CAPN2P17655 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.84■□□□□ 0.45
CAPN2P17655 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN2P17655 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN2P17655 AC068587.6-202ENST00000641839 5619 ntBASIC17.84■□□□□ 0.45
CAPN2P17655 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN2P17655 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN2P17655 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 AC006001.1-201ENST00000325130 474 ntBASIC17.84■□□□□ 0.45
CAPN2P17655 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.84■□□□□ 0.45
CAPN2P17655 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.84■□□□□ 0.45
CAPN2P17655 AC104306.2-201ENST00000451877 341 ntBASIC17.84■□□□□ 0.45
CAPN2P17655 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.84■□□□□ 0.45
CAPN2P17655 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.84■□□□□ 0.45
CAPN2P17655 CLUHP6-201ENST00000580789 941 ntBASIC17.84■□□□□ 0.45
CAPN2P17655 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.84■□□□□ 0.45
CAPN2P17655 AC020914.3-201ENST00000594712 304 ntBASIC17.84■□□□□ 0.45
CAPN2P17655 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CAPN2P17655 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.84■□□□□ 0.45
CAPN2P17655 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.84■□□□□ 0.45
CAPN2P17655 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN2P17655 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CAPN2P17655 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN2P17655 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CAPN2P17655 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN2P17655 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN2P17655 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CAPN2P17655 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CAPN2P17655 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CAPN2P17655 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN2P17655 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN2P17655 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN2P17655 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN2P17655 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.83■□□□□ 0.45
CAPN2P17655 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN2P17655 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN2P17655 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN2P17655 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN2P17655 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN2P17655 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN2P17655 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CAPN2P17655 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN2P17655 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN2P17655 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN2P17655 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN2P17655 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CAPN2P17655 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN2P17655 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN2P17655 FXNP2-201ENST00000411625 547 ntBASIC17.83■□□□□ 0.44
CAPN2P17655 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.83■□□□□ 0.44
CAPN2P17655 AL591846.1-201ENST00000451736 433 ntBASIC17.83■□□□□ 0.44
CAPN2P17655 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPN2P17655 RN7SL769P-201ENST00000469386 295 ntBASIC17.83■□□□□ 0.44
CAPN2P17655 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CAPN2P17655 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.83■□□□□ 0.44
CAPN2P17655 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPN2P17655 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.83■□□□□ 0.44
CAPN2P17655 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPN2P17655 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPN2P17655 MIR4722-201ENST00000578292 60 ntBASIC17.83■□□□□ 0.44
CAPN2P17655 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPN2P17655 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.83■□□□□ 0.44
CAPN2P17655 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.83■□□□□ 0.44
CAPN2P17655 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPN2P17655 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN2P17655 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN2P17655 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN2P17655 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN2P17655 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN2P17655 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN2P17655 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.83■□□□□ 0.44
CAPN2P17655 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms