Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC7O00311 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC7O00311 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC7O00311 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
CDC7O00311 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC7O00311 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC7O00311 AC004890.2-204ENST00000481968 304 ntBASIC15.16■□□□□ 0.02
CDC7O00311 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC7O00311 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 AL390955.2-201ENST00000603032 514 ntBASIC15.16■□□□□ 0.02
CDC7O00311 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC7O00311 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.16■□□□□ 0.02
CDC7O00311 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CDC7O00311 AC004840.1-201ENST00000636359 365 ntBASIC15.16■□□□□ 0.02
CDC7O00311 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDC7O00311 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDC7O00311 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDC7O00311 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.16■□□□□ 0.02
CDC7O00311 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.16■□□□□ 0.02
CDC7O00311 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDC7O00311 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.16■□□□□ 0.02
CDC7O00311 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CDC7O00311 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC7O00311 REXO1L4P-201ENST00000605109 1937 ntBASIC15.15■□□□□ 0.02
CDC7O00311 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDC7O00311 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDC7O00311 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDC7O00311 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDC7O00311 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC7O00311 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDC7O00311 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.15■□□□□ 0.02
CDC7O00311 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC7O00311 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC7O00311 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.15■□□□□ 0.02
CDC7O00311 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.15■□□□□ 0.02
CDC7O00311 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC7O00311 AC000095.1-201ENST00000603208 874 ntBASIC15.15■□□□□ 0.02
CDC7O00311 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CDC7O00311 AL158212.4-201ENST00000624062 1286 ntBASIC15.15■□□□□ 0.02
CDC7O00311 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC7O00311 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDC7O00311 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC7O00311 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC7O00311 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC7O00311 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDC7O00311 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.15■□□□□ 0.02
CDC7O00311 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDC7O00311 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDC7O00311 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDC7O00311 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDC7O00311 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.14■□□□□ 0.01
CDC7O00311 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.14■□□□□ 0.01
CDC7O00311 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.14■□□□□ 0.01
CDC7O00311 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDC7O00311 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.14■□□□□ 0.01
CDC7O00311 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.14■□□□□ 0.01
CDC7O00311 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.14■□□□□ 0.01
CDC7O00311 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.14■□□□□ 0.01
CDC7O00311 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.14■□□□□ 0.01
CDC7O00311 AC135586.1-201ENST00000539323 574 ntBASIC15.14■□□□□ 0.01
CDC7O00311 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.14■□□□□ 0.01
CDC7O00311 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.14■□□□□ 0.01
CDC7O00311 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.14■□□□□ 0.01
CDC7O00311 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.14■□□□□ 0.01
CDC7O00311 AC011467.4-201ENST00000594891 528 ntBASIC15.14■□□□□ 0.01
CDC7O00311 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.14■□□□□ 0.01
CDC7O00311 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDC7O00311 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms