Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 NIFKP9-201ENST00000419265 221 ntBASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 SLC29A4P2-201ENST00000504749 1089 ntBASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 AC133552.2-202ENST00000575694 574 ntBASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 AC005332.3-201ENST00000589904 676 ntBASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 RALB-208ENST00000631312 311 ntTSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 AL139011.1-202ENST00000642063 584 ntBASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 AL845472.1-202ENST00000624675 4080 ntBASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 AL008628.1-201ENST00000564198 5187 ntBASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 VPS8-227ENST00000625842 4969 ntAPPRIS P4 TSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 RAPGEF3-204ENST00000405493 5751 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 AC008677.1-201ENST00000519230 1561 ntBASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC8.52□□□□□ -1.05
CHKB-CPT1BH3BT56 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 CSPG4P10-201ENST00000456932 4817 ntBASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 AC092919.2-201ENST00000623631 1645 ntBASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 EGFR-201ENST00000275493 9821 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC8.51□□□□□ -1.05
CHKB-CPT1BH3BT56 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms