RNA–Protein interactions for RNA: ENST00000275493.6

EGFR-201, Transcript of epidermal growth factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGFR, Length 9,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-201ENST00000275493 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
EGFR-201ENST00000275493 SUPT5HO00267 1087 aaKnown RBP18■□□□□ 0.47
EGFR-201ENST00000275493 NISCHQ9Y2I1 1504 aa17.77■□□□□ 0.43
EGFR-201ENST00000275493 SHROOM4Q9ULL8 1493 aa17.73■□□□□ 0.43
EGFR-201ENST00000275493 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
EGFR-201ENST00000275493 FAM9AQ8IZU1 332 aaPredicted RBP17.52■□□□□ 0.4
EGFR-201ENST00000275493 APLP2Q06481 763 aa17.47■□□□□ 0.39
EGFR-201ENST00000275493 PELP1Q8IZL8 1130 aaKnown RBP17.22■□□□□ 0.35
EGFR-201ENST00000275493 TTBK1Q5TCY1 1321 aaPredicted RBP17.07■□□□□ 0.32
EGFR-201ENST00000275493 RANGAP1P46060 587 aaPredicted RBP17.03■□□□□ 0.32
EGFR-201ENST00000275493 ATP1B4Q9UN42 357 aaPredicted RBP16.98■□□□□ 0.31
EGFR-201ENST00000275493 TRIM41Q8WV44 630 aa16.69■□□□□ 0.26
EGFR-201ENST00000275493 PCGF6Q9BYE7 350 aa16.66■□□□□ 0.26
EGFR-201ENST00000275493 UBTFP17480 764 aaKnown RBP16.65■□□□□ 0.26
EGFR-201ENST00000275493 MYT1LQ9UL68 1186 aa16.58■□□□□ 0.24
EGFR-201ENST00000275493 ERICH6Q7L0X2 663 aa16.54■□□□□ 0.24
EGFR-201ENST00000275493 CCER1Q8TC90 406 aaPredicted RBP16.5■□□□□ 0.23
EGFR-201ENST00000275493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
EGFR-201ENST00000275493 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
EGFR-201ENST00000275493 CENPBP07199 599 aaPredicted RBP16.37■□□□□ 0.21
EGFR-201ENST00000275493 ZEB1P37275 1124 aaPredicted RBP16.34■□□□□ 0.21
EGFR-201ENST00000275493 NEFLP07196 543 aa16.29■□□□□ 0.2
EGFR-201ENST00000275493 CHIC1Q5VXU3 224 aa16.28■□□□□ 0.2
EGFR-201ENST00000275493 POLR3GLQ9BT43 218 aa16.2■□□□□ 0.18
EGFR-201ENST00000275493 ITGAEP38570 1179 aa16.16■□□□□ 0.18
EGFR-201ENST00000275493 PPARGC1BQ86YN6 1023 aaKnown RBP16.16■□□□□ 0.18
EGFR-201ENST00000275493 YTHDC1Q96MU7 727 aaKnown RBP16.16■□□□□ 0.18
EGFR-201ENST00000275493 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
EGFR-201ENST00000275493 DAXXQ9UER7 740 aaPredicted RBP15.97■□□□□ 0.15
EGFR-201ENST00000275493 CNGB1Q14028 1251 aaPredicted RBP15.96■□□□□ 0.15
EGFR-201ENST00000275493 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
EGFR-201ENST00000275493 ABCC9O60706 1549 aa15.85■□□□□ 0.13
EGFR-201ENST00000275493 FBLN2P98095 1184 aa15.8■□□□□ 0.12
EGFR-201ENST00000275493 TRIM26Q12899 539 aaPredicted RBP15.79■□□□□ 0.12
EGFR-201ENST00000275493 FAM50AQ14320 339 aaKnown RBP15.77■□□□□ 0.11
EGFR-201ENST00000275493 TRIM52Q96A61 297 aa15.74■□□□□ 0.11
EGFR-201ENST00000275493 BCANQ96GW7 911 aa15.68■□□□□ 0.1
EGFR-201ENST00000275493 CLSPNQ9HAW4 1339 aa15.66■□□□□ 0.1
EGFR-201ENST00000275493 LOC105371045A0A1W2PR82 267 aa15.61■□□□□ 0.09
EGFR-201ENST00000275493 SLC24A1O60721 1099 aa15.6■□□□□ 0.09
EGFR-201ENST00000275493 ZNF326Q5BKZ1 582 aaKnown RBP15.59■□□□□ 0.09
EGFR-201ENST00000275493 ZNF316A6NFI3 1004 aaPredicted RBP15.59■□□□□ 0.09
EGFR-201ENST00000275493 MYT1Q01538 1121 aa15.56■□□□□ 0.08
EGFR-201ENST00000275493 NEUROD1Q13562 356 aa15.53■□□□□ 0.08
EGFR-201ENST00000275493 ZBTB47Q9UFB7 747 aaPredicted RBP15.51■□□□□ 0.07
EGFR-201ENST00000275493 ESF1Q9H501 851 aaKnown RBP15.51■□□□□ 0.07
EGFR-201ENST00000275493 HRCP23327 699 aa15.48■□□□□ 0.07
EGFR-201ENST00000275493 ARID3CA6NKF2 412 aa15.48■□□□□ 0.07
EGFR-201ENST00000275493 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
EGFR-201ENST00000275493 NEFMP07197 916 aa15.43■□□□□ 0.06
EGFR-201ENST00000275493 ZNF777Q9ULD5 760 aaPredicted RBP15.39■□□□□ 0.05
EGFR-201ENST00000275493 CANXP27824 592 aaKnown RBP15.38■□□□□ 0.05
EGFR-201ENST00000275493 BCL11AQ9H165 835 aa15.38■□□□□ 0.05
EGFR-201ENST00000275493 P3H3Q8IVL6 736 aa15.37■□□□□ 0.05
EGFR-201ENST00000275493 RTL5Q5HYW3 569 aaPredicted RBP15.35■□□□□ 0.05
EGFR-201ENST00000275493 STAG3Q9UJ98 1225 aa15.35■□□□□ 0.05
EGFR-201ENST00000275493 NPM1P06748 294 aaKnown RBP eCLIP15.33■□□□□ 0.04
EGFR-201ENST00000275493 ANP32CO43423 234 aa15.29■□□□□ 0.04
EGFR-201ENST00000275493 CDK11AQ9UQ88 783 aaPredicted RBP15.29■□□□□ 0.04
EGFR-201ENST00000275493 DIEXFQ68CQ4 756 aaKnown RBP15.26■□□□□ 0.03
EGFR-201ENST00000275493 CHGAP10645 457 aaKnown RBP15.25■□□□□ 0.03
EGFR-201ENST00000275493 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
EGFR-201ENST00000275493 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
EGFR-201ENST00000275493 A0A0G2JS52 829 aa15.05■□□□□ -0
EGFR-201ENST00000275493 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
EGFR-201ENST00000275493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -0
EGFR-201ENST00000275493 CHMP7Q8WUX9 453 aaPredicted RBP14.99□□□□□ -0.01
EGFR-201ENST00000275493 ZBTB7CA1YPR0 619 aa14.96□□□□□ -0.02
EGFR-201ENST00000275493 TONSLQ96HA7 1378 aa14.95□□□□□ -0.02
EGFR-201ENST00000275493 C14orf37Q86TY3 774 aa14.93□□□□□ -0.02
EGFR-201ENST00000275493 PLEKHG5O94827 1062 aa14.91□□□□□ -0.02
EGFR-201ENST00000275493 PPP1R15AO75807 674 aaPredicted RBP14.91□□□□□ -0.02
EGFR-201ENST00000275493 CHIC2Q9UKJ5 165 aa14.9□□□□□ -0.02
EGFR-201ENST00000275493 ARID4BQ4LE39 1312 aaPredicted RBP14.89□□□□□ -0.03
EGFR-201ENST00000275493 NPM2Q86SE8 214 aaKnown RBP14.88□□□□□ -0.03
EGFR-201ENST00000275493 HSP90AA1P07900 732 aaKnown RBP14.88□□□□□ -0.03
EGFR-201ENST00000275493 TSPY4P0CV99 314 aa14.88□□□□□ -0.03
EGFR-201ENST00000275493 TSPY10P0CW01 314 aa14.88□□□□□ -0.03
EGFR-201ENST00000275493 SENP3Q9H4L4 574 aaPredicted RBP14.87□□□□□ -0.03
EGFR-201ENST00000275493 HAP1P54257 671 aaPredicted RBP14.86□□□□□ -0.03
EGFR-201ENST00000275493 ANP32AP39687 249 aaKnown RBP14.85□□□□□ -0.03
EGFR-201ENST00000275493 KCNH8Q96L42 1107 aa14.83□□□□□ -0.03
EGFR-201ENST00000275493 KDM2AQ9Y2K7 1162 aa14.82□□□□□ -0.04
EGFR-201ENST00000275493 WDR43Q15061 677 aaKnown RBP eCLIP14.8□□□□□ -0.04
EGFR-201ENST00000275493 UPF2Q9HAU5 1272 aaKnown RBP14.8□□□□□ -0.04
EGFR-201ENST00000275493 MTUS2Q5JR59 1369 aa14.79□□□□□ -0.04
EGFR-201ENST00000275493 ANP32BQ92688 251 aaKnown RBP14.78□□□□□ -0.04
EGFR-201ENST00000275493 SALL2Q9Y467 1007 aaPredicted RBP14.78□□□□□ -0.04
EGFR-201ENST00000275493 GTF3C3Q9Y5Q9 886 aa14.77□□□□□ -0.04
EGFR-201ENST00000275493 FAM9BQ8IZU0 186 aa14.76□□□□□ -0.05
EGFR-201ENST00000275493 ERCC6Q03468 1493 aa14.74□□□□□ -0.05
EGFR-201ENST00000275493 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
EGFR-201ENST00000275493 MYH16Q9H6N6 1097 aa14.73□□□□□ -0.05
EGFR-201ENST00000275493 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.72□□□□□ -0.05
EGFR-201ENST00000275493 TMC1Q8TDI8 760 aa14.72□□□□□ -0.05
EGFR-201ENST00000275493 PLEKHD1A6NEE1 506 aa14.7□□□□□ -0.06
EGFR-201ENST00000275493 HNRNPUQ00839 825 aaKnown RBP eCLIP14.7□□□□□ -0.06
EGFR-201ENST00000275493 ARXQ96QS3 562 aa14.68□□□□□ -0.06
EGFR-201ENST00000275493 CDK11BP21127 795 aaKnown RBP14.67□□□□□ -0.06
EGFR-201ENST00000275493 TRHP20396 242 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms