RNA–Protein interactions for RNA: ENST00000456932.6

CSPG4P10-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

BASIC

Gene CSPG4P10, Length 4,817 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-201ENST00000456932 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
CSPG4P10-201ENST00000456932 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
CSPG4P10-201ENST00000456932 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
CSPG4P10-201ENST00000456932 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
CSPG4P10-201ENST00000456932 CCDC180Q9P1Z9 1646 aa18.09■□□□□ 0.49
CSPG4P10-201ENST00000456932 ZCCHC6Q5VYS8 1495 aaKnown RBP18.05■□□□□ 0.48
CSPG4P10-201ENST00000456932 EHMT2Q96KQ7 1210 aa17.95■□□□□ 0.46
CSPG4P10-201ENST00000456932 PELP1Q8IZL8 1130 aaKnown RBP17.87■□□□□ 0.45
CSPG4P10-201ENST00000456932 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
CSPG4P10-201ENST00000456932 CHIC1Q5VXU3 224 aa17.86■□□□□ 0.45
CSPG4P10-201ENST00000456932 TRIM41Q8WV44 630 aa17.84■□□□□ 0.45
CSPG4P10-201ENST00000456932 PCGF6Q9BYE7 350 aa17.77■□□□□ 0.44
CSPG4P10-201ENST00000456932 ABCC9O60706 1549 aa17.76■□□□□ 0.43
CSPG4P10-201ENST00000456932 MYT1Q01538 1121 aa17.65■□□□□ 0.42
CSPG4P10-201ENST00000456932 LOC105371045A0A1W2PR82 267 aa17.51■□□□□ 0.39
CSPG4P10-201ENST00000456932 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
CSPG4P10-201ENST00000456932 DCAF1Q9Y4B6 1507 aa17.39■□□□□ 0.37
CSPG4P10-201ENST00000456932 APLP2Q06481 763 aa17.35■□□□□ 0.37
CSPG4P10-201ENST00000456932 TTBK1Q5TCY1 1321 aaPredicted RBP17.34■□□□□ 0.37
CSPG4P10-201ENST00000456932 TRIM26Q12899 539 aaPredicted RBP17.31■□□□□ 0.36
CSPG4P10-201ENST00000456932 UBTFP17480 764 aaKnown RBP17.29■□□□□ 0.36
CSPG4P10-201ENST00000456932 HRCP23327 699 aa17.27■□□□□ 0.36
CSPG4P10-201ENST00000456932 ZEB1P37275 1124 aaPredicted RBP17.26■□□□□ 0.35
CSPG4P10-201ENST00000456932 CENPBP07199 599 aaPredicted RBP17.25■□□□□ 0.35
CSPG4P10-201ENST00000456932 PABPN1Q86U42 306 aaKnown RBP eCLIP17.24■□□□□ 0.35
CSPG4P10-201ENST00000456932 RANGAP1P46060 587 aaPredicted RBP17.18■□□□□ 0.34
CSPG4P10-201ENST00000456932 PPARGC1BQ86YN6 1023 aaKnown RBP17.16■□□□□ 0.34
CSPG4P10-201ENST00000456932 NACADO15069 1562 aa17.13■□□□□ 0.33
CSPG4P10-201ENST00000456932 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
CSPG4P10-201ENST00000456932 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
CSPG4P10-201ENST00000456932 ERICH6Q7L0X2 663 aa17.09■□□□□ 0.33
CSPG4P10-201ENST00000456932 MYO15BQ96JP2 1530 aa17.08■□□□□ 0.32
CSPG4P10-201ENST00000456932 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
CSPG4P10-201ENST00000456932 CECR2Q9BXF3 1484 aa16.84■□□□□ 0.29
CSPG4P10-201ENST00000456932 YTHDC1Q96MU7 727 aaKnown RBP16.83■□□□□ 0.29
CSPG4P10-201ENST00000456932 ATP1B4Q9UN42 357 aaPredicted RBP16.8■□□□□ 0.28
CSPG4P10-201ENST00000456932 CSRNP3Q8WYN3 585 aa16.76■□□□□ 0.27
CSPG4P10-201ENST00000456932 BAZ1AQ9NRL2 1556 aaPredicted RBP16.76■□□□□ 0.27
CSPG4P10-201ENST00000456932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
CSPG4P10-201ENST00000456932 MROH2BQ7Z745 1585 aa16.71■□□□□ 0.27
CSPG4P10-201ENST00000456932 HNRNPUL2Q1KMD3 747 aaKnown RBP16.69■□□□□ 0.26
CSPG4P10-201ENST00000456932 NEFLP07196 543 aa16.56■□□□□ 0.24
CSPG4P10-201ENST00000456932 WIZO95785 1651 aa16.54■□□□□ 0.24
CSPG4P10-201ENST00000456932 ITGAEP38570 1179 aa16.54■□□□□ 0.24
CSPG4P10-201ENST00000456932 BAZ1BQ9UIG0 1483 aaKnown RBP16.5■□□□□ 0.23
CSPG4P10-201ENST00000456932 EEA1Q15075 1411 aa16.49■□□□□ 0.23
CSPG4P10-201ENST00000456932 WRNQ14191 1432 aaPredicted RBP eCLIP16.47■□□□□ 0.23
CSPG4P10-201ENST00000456932 CCDC88BA6NC98 1476 aa16.45■□□□□ 0.22
CSPG4P10-201ENST00000456932 TOP2AP11388 1531 aaKnown RBP16.43■□□□□ 0.22
CSPG4P10-201ENST00000456932 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
CSPG4P10-201ENST00000456932 MYT1LQ9UL68 1186 aa16.4■□□□□ 0.22
CSPG4P10-201ENST00000456932 GOLGA3Q08378 1498 aa16.39■□□□□ 0.21
CSPG4P10-201ENST00000456932 DIEXFQ68CQ4 756 aaKnown RBP16.38■□□□□ 0.21
CSPG4P10-201ENST00000456932 SMARCA4P51532 1647 aa16.36■□□□□ 0.21
CSPG4P10-201ENST00000456932 ABCC8Q09428 1581 aa16.36■□□□□ 0.21
CSPG4P10-201ENST00000456932 TNIKQ9UKE5 1360 aa16.35■□□□□ 0.21
CSPG4P10-201ENST00000456932 CLIP1P30622 1438 aa16.33■□□□□ 0.2
CSPG4P10-201ENST00000456932 SOGA1O94964 1423 aa16.32■□□□□ 0.2
CSPG4P10-201ENST00000456932 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
CSPG4P10-201ENST00000456932 GTF3C3Q9Y5Q9 886 aa16.29■□□□□ 0.2
CSPG4P10-201ENST00000456932 CEP164Q9UPV0 1460 aa16.28■□□□□ 0.2
CSPG4P10-201ENST00000456932 SMARCA2P51531 1590 aa16.27■□□□□ 0.2
CSPG4P10-201ENST00000456932 P3H3Q8IVL6 736 aa16.24■□□□□ 0.19
CSPG4P10-201ENST00000456932 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
CSPG4P10-201ENST00000456932 ATAD2BQ9ULI0 1458 aa16.17■□□□□ 0.18
CSPG4P10-201ENST00000456932 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
CSPG4P10-201ENST00000456932 FBLN2P98095 1184 aa16.13■□□□□ 0.17
CSPG4P10-201ENST00000456932 NEUROD1Q13562 356 aa16.08■□□□□ 0.16
CSPG4P10-201ENST00000456932 RTL5Q5HYW3 569 aaPredicted RBP16.07■□□□□ 0.16
CSPG4P10-201ENST00000456932 ACIN1Q9UKV3 1341 aaKnown RBP16.02■□□□□ 0.16
CSPG4P10-201ENST00000456932 DAXXQ9UER7 740 aaPredicted RBP16.02■□□□□ 0.15
CSPG4P10-201ENST00000456932 RUSC2Q8N2Y8 1516 aa16.02■□□□□ 0.15
CSPG4P10-201ENST00000456932 TRIM52Q96A61 297 aa16■□□□□ 0.15
CSPG4P10-201ENST00000456932 VPS8Q8N3P4 1428 aa15.99■□□□□ 0.15
CSPG4P10-201ENST00000456932 CUX2O14529 1486 aa15.97■□□□□ 0.15
CSPG4P10-201ENST00000456932 ARID3CA6NKF2 412 aa15.95■□□□□ 0.14
CSPG4P10-201ENST00000456932 BCANQ96GW7 911 aa15.94■□□□□ 0.14
CSPG4P10-201ENST00000456932 RAPGEF2Q9Y4G8 1499 aa15.9■□□□□ 0.14
CSPG4P10-201ENST00000456932 CARMIL1Q5VZK9 1371 aa15.9■□□□□ 0.14
CSPG4P10-201ENST00000456932 MTUS2Q5JR59 1369 aa15.87■□□□□ 0.13
CSPG4P10-201ENST00000456932 CADPSQ9ULU8 1353 aa15.86■□□□□ 0.13
CSPG4P10-201ENST00000456932 BICRAQ9NZM4 1560 aa15.86■□□□□ 0.13
CSPG4P10-201ENST00000456932 POLR3GLQ9BT43 218 aa15.85■□□□□ 0.13
CSPG4P10-201ENST00000456932 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
CSPG4P10-201ENST00000456932 NCAPD3P42695 1498 aa15.83■□□□□ 0.12
CSPG4P10-201ENST00000456932 CDK11AQ9UQ88 783 aaPredicted RBP15.83■□□□□ 0.12
CSPG4P10-201ENST00000456932 EIF4G1Q04637 1599 aaKnown RBP15.81■□□□□ 0.12
CSPG4P10-201ENST00000456932 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
CSPG4P10-201ENST00000456932 FHAD1B1AJZ9 1412 aa15.79■□□□□ 0.12
CSPG4P10-201ENST00000456932 SYNJ1O43426 1573 aa15.79■□□□□ 0.12
CSPG4P10-201ENST00000456932 CCNB3Q8WWL7 1395 aa15.78■□□□□ 0.12
CSPG4P10-201ENST00000456932 KANK4Q5T7N3 995 aaPredicted RBP15.78■□□□□ 0.12
CSPG4P10-201ENST00000456932 ANP32CO43423 234 aa15.78■□□□□ 0.12
CSPG4P10-201ENST00000456932 TONSLQ96HA7 1378 aa15.78■□□□□ 0.12
CSPG4P10-201ENST00000456932 EIF5BO60841 1220 aaKnown RBP15.76■□□□□ 0.11
CSPG4P10-201ENST00000456932 NPM1P06748 294 aaKnown RBP eCLIP15.76■□□□□ 0.11
CSPG4P10-201ENST00000456932 CLSPNQ9HAW4 1339 aa15.74■□□□□ 0.11
CSPG4P10-201ENST00000456932 ZNF777Q9ULD5 760 aaPredicted RBP15.74■□□□□ 0.11
CSPG4P10-201ENST00000456932 MIER1Q8N108 512 aa15.73■□□□□ 0.11
CSPG4P10-201ENST00000456932 CNGB1Q14028 1251 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms