Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.78□□□□□ -0.52
SSBP4Q9BWG4 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP4Q9BWG4 REXO1L1P-202ENST00000608646 1974 ntBASIC11.78□□□□□ -0.52
SSBP4Q9BWG4 AC134407.2-201ENST00000625089 1978 ntBASIC11.78□□□□□ -0.52
SSBP4Q9BWG4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.77□□□□□ -0.52
SSBP4Q9BWG4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
SSBP4Q9BWG4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.77□□□□□ -0.52
SSBP4Q9BWG4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
SSBP4Q9BWG4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP4Q9BWG4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP4Q9BWG4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP4Q9BWG4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
SSBP4Q9BWG4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP4Q9BWG4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP4Q9BWG4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP4Q9BWG4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP4Q9BWG4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
SSBP4Q9BWG4 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 TSPY19P-201ENST00000418461 509 ntBASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 TSPY18P-201ENST00000441642 509 ntBASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 HSPA7-201ENST00000445535 1927 ntBASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.77□□□□□ -0.53
SSBP4Q9BWG4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 AC127383.1-201ENST00000444697 1800 ntBASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 REXO1L2P-201ENST00000425429 2069 ntBASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 CXCL1P1-201ENST00000502804 216 ntBASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 OR7E14P-202ENST00000530490 1290 ntBASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.76□□□□□ -0.53
SSBP4Q9BWG4 MIR1199-201ENST00000621445 119 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms