Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 AL109936.8-201ENST00000641772 604 ntBASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP1Q8TDR0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 KRT18P64-201ENST00000434946 1219 ntBASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 SDHAP3-202ENST00000515467 728 ntBASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 IGHV3-42-201ENST00000520410 361 ntBASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF3IP1Q8TDR0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRAF3IP1Q8TDR0 CICP11-201ENST00000434745 2827 ntBASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 AGAP7P-201ENST00000582299 2062 ntBASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 AGAP14-201ENST00000624701 2060 ntBASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 AL133267.1-201ENST00000398220 340 ntBASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 LINC01115-203ENST00000606068 577 ntBASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 AL158211.3-201ENST00000607385 239 ntBASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms