Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC034105.1-201ENST00000563488 319 ntBASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 AC104109.2-201ENST00000602919 1418 ntBASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 MTHFR-210ENST00000641407 2387 ntBASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 AC011467.4-201ENST00000594891 528 ntBASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 AP000845.1-201ENST00000581677 2131 ntBASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NUDCD3Q8IVD9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.06
NUDCD3Q8IVD9 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 MIR346-201ENST00000362234 95 ntBASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 AL355306.1-201ENST00000415580 579 ntBASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 FAM86C2P-203ENST00000528684 1004 ntBASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 AC145285.3-201ENST00000564603 959 ntBASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 AP000842.3-202ENST00000569238 1080 ntBASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUDCD3Q8IVD9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms