Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.51e-7■■□□□ 14.3
U2AF2P26368 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.52■■□□□ 1.361e-7■■□□□ 14.3
U2AF2P26368 RAP1B-206ENST00000425247 855 ntTSL 522.24■■□□□ 1.151e-7■■□□□ 14.3
U2AF2P26368 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.63■■□□□ 1.051e-7■■□□□ 14.3
U2AF2P26368 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.81■□□□□ 0.761e-7■■□□□ 14.3
U2AF2P26368 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.43■□□□□ 0.71e-7■■□□□ 14.3
U2AF2P26368 RAP1B-210ENST00000463493 781 ntTSL 417.88■□□□□ 0.451e-7■■□□□ 14.3
U2AF2P26368 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.031e-7■■□□□ 14.3
U2AF2P26368 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC8.32□□□□□ -1.081e-7■■□□□ 14.3
U2AF2P26368 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.561e-7■■□□□ 14.3
U2AF2P26368 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.581e-6■■□□□ 14.3
U2AF2P26368 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.581e-6■■□□□ 14.3
U2AF2P26368 SELENOO-202ENST00000492092 1626 ntTSL 1 (best)23.57■■□□□ 1.361e-6■■□□□ 14.3
U2AF2P26368 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.651e-6■■□□□ 14.3
U2AF2P26368 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC14.65□□□□□ -0.061e-7■■□□□ 14.3
U2AF2P26368 TLE1-204ENST00000418319 936 ntTSL 518.27■□□□□ 0.524e-7■■□□□ 14.3
U2AF2P26368 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.324e-7■■□□□ 14.3
U2AF2P26368 TLE1-201ENST00000376463 1115 ntTSL 2 BASIC11.67□□□□□ -0.544e-7■■□□□ 14.3
U2AF2P26368 PHYKPL-211ENST00000494126 2297 ntTSL 1 (best)28.67■■■□□ 2.185e-10■■□□□ 14.3
U2AF2P26368 PHYKPL-204ENST00000474052 1539 ntTSL 1 (best)25.8■■□□□ 1.725e-10■■□□□ 14.3
U2AF2P26368 PHYKPL-209ENST00000489262 2780 ntTSL 224.89■■□□□ 1.575e-10■■□□□ 14.3
U2AF2P26368 PHYKPL-210ENST00000493197 1969 ntTSL 221.18■□□□□ 0.985e-10■■□□□ 14.3
U2AF2P26368 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.945e-10■■□□□ 14.3
U2AF2P26368 AL662899.3-203ENST00000409691 1903 ntTSL 316.78■□□□□ 0.281e-6■■□□□ 14.3
U2AF2P26368 AL662899.3-201ENST00000375880 2487 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.261e-6■■□□□ 14.3
U2AF2P26368 AL662899.3-202ENST00000617558 991 ntTSL 1 (best) BASIC13.37□□□□□ -0.271e-6■■□□□ 14.3
U2AF2P26368 PPIL2-205ENST00000446951 1926 ntTSL 1 (best)17.33■□□□□ 0.363e-9■■□□□ 14.3
U2AF2P26368 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.551e-8■■□□□ 14.3
U2AF2P26368 DDX41-202ENST00000503078 2375 ntTSL 228.77■■■□□ 2.22e-13■■□□□ 14.3
U2AF2P26368 DDX41-201ENST00000330503 2137 ntTSL 1 (best)19.67■□□□□ 0.742e-13■■□□□ 14.3
U2AF2P26368 DDX41-217ENST00000515562 1184 ntTSL 1 (best)19.38■□□□□ 0.692e-13■■□□□ 14.3
U2AF2P26368 DDX41-207ENST00000507900 1564 ntTSL 519.22■□□□□ 0.672e-13■■□□□ 14.3
U2AF2P26368 DDX41-205ENST00000505081 2949 ntTSL 218.7■□□□□ 0.582e-13■■□□□ 14.3
U2AF2P26368 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.272e-13■■□□□ 14.3
U2AF2P26368 DDX41-212ENST00000511040 721 ntTSL 315.7■□□□□ 0.12e-13■■□□□ 14.3
U2AF2P26368 DDX41-206ENST00000506965 560 ntTSL 514.66□□□□□ -0.062e-13■■□□□ 14.3
U2AF2P26368 DDX41-210ENST00000509576 819 ntTSL 314.66□□□□□ -0.062e-13■■□□□ 14.3
U2AF2P26368 DDX41-215ENST00000512431 904 ntTSL 513.62□□□□□ -0.232e-13■■□□□ 14.3
U2AF2P26368 DDX41-219ENST00000629036 606 ntTSL 4 BASIC12.56□□□□□ -0.42e-13■■□□□ 14.3
U2AF2P26368 DDX41-203ENST00000504781 618 ntTSL 311.73□□□□□ -0.532e-13■■□□□ 14.3
U2AF2P26368 DDX41-209ENST00000508279 776 ntTSL 510.47□□□□□ -0.732e-13■■□□□ 14.3
U2AF2P26368 ARMC8-221ENST00000491704 2777 ntTSL 5 BASIC14.17□□□□□ -0.142e-6■■□□□ 14.3
U2AF2P26368 ARMC8-204ENST00000461822 2221 ntTSL 2 BASIC12.73□□□□□ -0.372e-6■■□□□ 14.3
U2AF2P26368 ARMC8-217ENST00000481646 3043 ntTSL 1 (best) BASIC12.54□□□□□ -0.42e-6■■□□□ 14.3
U2AF2P26368 ARMC8-223ENST00000538260 4728 ntTSL 2 BASIC12.16□□□□□ -0.462e-6■■□□□ 14.3
U2AF2P26368 ARMC8-218ENST00000485396 1920 ntTSL 2 BASIC10.88□□□□□ -0.672e-6■■□□□ 14.3
U2AF2P26368 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.892e-6■■□□□ 14.3
U2AF2P26368 ARMC8-202ENST00000460495 2189 ntTSL 29.11□□□□□ -0.952e-6■■□□□ 14.3
U2AF2P26368 ARMC8-205ENST00000463485 1059 ntTSL 36.8□□□□□ -1.322e-6■■□□□ 14.3
U2AF2P26368 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.17e-7■■□□□ 14.3
U2AF2P26368 CADM1-210ENST00000540951 572 ntTSL 322.24■■□□□ 1.151e-6■■□□□ 14.3
U2AF2P26368 CADM1-211ENST00000541434 1112 ntTSL 1 (best)18.07■□□□□ 0.481e-6■■□□□ 14.3
U2AF2P26368 CADM1-214ENST00000543249 565 ntTSL 46.75□□□□□ -1.331e-6■■□□□ 14.3
U2AF2P26368 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.551e-6■■□□□ 14.3
U2AF2P26368 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.361e-6■■□□□ 14.3
U2AF2P26368 DRAM2-204ENST00000463682 688 ntTSL 310.22□□□□□ -0.777e-8■■□□□ 14.3
U2AF2P26368 DRAM2-209ENST00000490780 769 ntTSL 27.06□□□□□ -1.287e-8■■□□□ 14.3
U2AF2P26368 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.312e-7■■□□□ 14.3
U2AF2P26368 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.81□□□□□ -1.322e-7■■□□□ 14.3
U2AF2P26368 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.632e-7■■□□□ 14.3
U2AF2P26368 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.47□□□□□ -1.692e-7■■□□□ 14.3
U2AF2P26368 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.742e-7■■□□□ 14.3
U2AF2P26368 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.924e-7■■□□□ 14.3
U2AF2P26368 NEDD9-204ENST00000448183 4934 ntTSL 1 (best)8.81□□□□□ -14e-7■■□□□ 14.3
U2AF2P26368 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.34□□□□□ -1.074e-7■■□□□ 14.3
U2AF2P26368 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.224e-7■■□□□ 14.3
U2AF2P26368 LYPLAL1-203ENST00000460522 1703 ntTSL 221.09■□□□□ 0.971e-7■■□□□ 14.3
U2AF2P26368 LYPLAL1-208ENST00000477938 1715 ntTSL 220.26■□□□□ 0.831e-7■■□□□ 14.3
U2AF2P26368 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.02■□□□□ 0.81e-7■■□□□ 14.3
U2AF2P26368 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.761e-7■■□□□ 14.3
U2AF2P26368 LYPLAL1-211ENST00000483635 2169 ntTSL 317.3■□□□□ 0.361e-7■■□□□ 14.3
U2AF2P26368 LYPLAL1-204ENST00000463964 1874 ntTSL 39.54□□□□□ -0.881e-7■■□□□ 14.3
U2AF2P26368 LYPLAL1-206ENST00000474379 1662 ntTSL 1 (best)8.73□□□□□ -1.011e-7■■□□□ 14.3
U2AF2P26368 LYPLAL1-209ENST00000478794 475 ntTSL 21.48□□□□□ -2.171e-7■■□□□ 14.3
U2AF2P26368 LYPLAL1-205ENST00000469590 1701 ntTSL 30.43□□□□□ -2.341e-7■■□□□ 14.3
U2AF2P26368 PHF11-208ENST00000476953 781 ntTSL 522.53■■□□□ 1.23e-6■■□□□ 14.3
U2AF2P26368 PHF11-207ENST00000467763 703 ntTSL 521.51■■□□□ 1.033e-6■■□□□ 14.3
U2AF2P26368 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.42■■□□□ 1.023e-6■■□□□ 14.3
U2AF2P26368 SRRM1-223ENST00000600523 575 ntTSL 514.68□□□□□ -0.062e-9■■□□□ 14.3
U2AF2P26368 LRP1-207ENST00000554174 2175 ntTSL 1 (best) BASIC14.16□□□□□ -0.143e-6■■□□□ 14.3
U2AF2P26368 LRP1-202ENST00000338962 2169 ntTSL 1 (best) BASIC12.8□□□□□ -0.363e-6■■□□□ 14.3
U2AF2P26368 ZMAT3-202ENST00000414084 743 ntTSL 412.05□□□□□ -0.483e-6■■□□□ 14.3
U2AF2P26368 SRRM1-221ENST00000593639 563 ntTSL 510.03□□□□□ -0.82e-9■■□□□ 14.3
U2AF2P26368 SRRM1-217ENST00000490543 673 ntTSL 59.76□□□□□ -0.852e-9■■□□□ 14.3
U2AF2P26368 SRRM1-205ENST00000462710 2624 ntTSL 59.75□□□□□ -0.852e-9■■□□□ 14.3
U2AF2P26368 SRRM1-211ENST00000478890 480 ntTSL 31.18□□□□□ -2.222e-9■■□□□ 14.3
U2AF2P26368 FUBP1-211ENST00000489495 2156 ntTSL 24.46□□□□□ -1.77e-11■■□□□ 14.3
U2AF2P26368 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.681e-6■■□□□ 14.3
U2AF2P26368 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC14.37□□□□□ -0.114e-6■■□□□ 14.3
U2AF2P26368 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.373e-6■■□□□ 14.3
U2AF2P26368 KDM5D-202ENST00000382806 5134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.326e-8■■□□□ 14.3
U2AF2P26368 KDM5D-209ENST00000492117 5235 ntTSL 213.01□□□□□ -0.336e-8■■□□□ 14.3
U2AF2P26368 KDM5D-201ENST00000317961 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.416e-8■■□□□ 14.3
U2AF2P26368 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC12.36□□□□□ -0.436e-8■■□□□ 14.3
U2AF2P26368 KDM5D-206ENST00000469599 5501 ntTSL 212.14□□□□□ -0.476e-8■■□□□ 14.3
U2AF2P26368 KDM5D-204ENST00000440077 4701 ntAPPRIS ALT2 TSL 510.54□□□□□ -0.726e-8■■□□□ 14.3
U2AF2P26368 ASPH-206ENST00000517661 809 ntTSL 2 BASIC9.42□□□□□ -0.92e-8■■□□□ 14.3
U2AF2P26368 HGD-203ENST00000470321 528 ntTSL 38.83□□□□□ -17e-16■■□□□ 14.3
U2AF2P26368 AC140504.1-201ENST00000568766 498 ntAPPRIS P1 TSL 226.33■■□□□ 1.812e-13■■□□□ 14.3
U2AF2P26368 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.182e-13■■□□□ 14.3
Retrieved 100 of 36,523 protein–RNA pairs in 198 ms