RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 AEBP2Q6ZN18 517 aaPredicted RBP13.77□□□□□ -0.21
SRRM1-211ENST00000478890 CHIC1Q5VXU3 224 aa12.97□□□□□ -0.33
SRRM1-211ENST00000478890 POTEDQ86YR6 584 aa12.26□□□□□ -0.45
SRRM1-211ENST00000478890 SENP3Q9H4L4 574 aaPredicted RBP12□□□□□ -0.49
SRRM1-211ENST00000478890 PHF23Q9BUL5 403 aaPredicted RBP11.65□□□□□ -0.54
SRRM1-211ENST00000478890 FOXD1Q16676 465 aa11.23□□□□□ -0.61
SRRM1-211ENST00000478890 MSH5O43196 834 aa10.98□□□□□ -0.65
SRRM1-211ENST00000478890 PIAS4Q8N2W9 510 aaPredicted RBP10.29□□□□□ -0.76
SRRM1-211ENST00000478890 CACNB1Q02641 598 aaPredicted RBP9.96□□□□□ -0.82
SRRM1-211ENST00000478890 PPP6R1Q9UPN7 881 aa9.71□□□□□ -0.86
SRRM1-211ENST00000478890 ADRA2BP18089 450 aa9.64□□□□□ -0.87
SRRM1-211ENST00000478890 POTEHQ6S545 545 aa9.45□□□□□ -0.9
SRRM1-211ENST00000478890 PLPPR3Q6T4P5 718 aa9.36□□□□□ -0.91
SRRM1-211ENST00000478890 DMRT2Q9Y5R5 561 aa9.35□□□□□ -0.91
SRRM1-211ENST00000478890 RNF39Q9H2S5 420 aa9.22□□□□□ -0.93
SRRM1-211ENST00000478890 MAPK8IP2Q13387 824 aaPredicted RBP9.12□□□□□ -0.95
SRRM1-211ENST00000478890 C1QBPQ07021 282 aaKnown RBP9.08□□□□□ -0.96
SRRM1-211ENST00000478890 DCAF8L1A6NGE4 600 aa8.99□□□□□ -0.97
SRRM1-211ENST00000478890 SCAF1Q9H7N4 1312 aaKnown RBP8.96□□□□□ -0.98
SRRM1-211ENST00000478890 HOXD11P31277 338 aaPredicted RBP8.63□□□□□ -1.03
SRRM1-211ENST00000478890 DNAJC5BQ9UF47 199 aa8.59□□□□□ -1.03
SRRM1-211ENST00000478890 SP7Q8TDD2 431 aaPredicted RBP8.41□□□□□ -1.06
SRRM1-211ENST00000478890 RNF216Q9NWF9 866 aaPredicted RBP8.32□□□□□ -1.08
SRRM1-211ENST00000478890 DSG3P32926 999 aa8.31□□□□□ -1.08
SRRM1-211ENST00000478890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.22□□□□□ -1.092e-10■■■□□ 19
SRRM1-211ENST00000478890 CHRDL2Q6WN34 429 aa8.18□□□□□ -1.1
SRRM1-211ENST00000478890 PLSCR2Q9NRY7 297 aa8.17□□□□□ -1.1
SRRM1-211ENST00000478890 CAPN15O75808 1086 aa8.14□□□□□ -1.11
SRRM1-211ENST00000478890 CNKSR2Q8WXI2 1034 aa8.14□□□□□ -1.11
SRRM1-211ENST00000478890 SPINK5Q9NQ38 1064 aaPredicted RBP8.05□□□□□ -1.12
SRRM1-211ENST00000478890 PPP4R3CPQ6ZMV5 832 aa8.03□□□□□ -1.12
SRRM1-211ENST00000478890 RBM42Q9BTD8 480 aaKnown RBP8.03□□□□□ -1.12
SRRM1-211ENST00000478890 U3KPZ7 1027 aaPredicted RBP7.91□□□□□ -1.14
SRRM1-211ENST00000478890 HAX1O00165 279 aa7.89□□□□□ -1.15
SRRM1-211ENST00000478890 LHX8Q68G74 356 aa7.86□□□□□ -1.15
SRRM1-211ENST00000478890 ABCB7O75027 752 aa7.81□□□□□ -1.16
SRRM1-211ENST00000478890 ZNF219Q9P2Y4 722 aaPredicted RBP7.78□□□□□ -1.16
SRRM1-211ENST00000478890 TRHP20396 242 aaPredicted RBP7.75□□□□□ -1.17
SRRM1-211ENST00000478890 PIP4P2Q8N4L2 257 aa7.75□□□□□ -1.17
SRRM1-211ENST00000478890 APLP2Q06481 763 aa7.72□□□□□ -1.17
SRRM1-211ENST00000478890 EVX2Q03828 476 aa7.64□□□□□ -1.19
SRRM1-211ENST00000478890 AKT1S1Q96B36 256 aa7.61□□□□□ -1.19
SRRM1-211ENST00000478890 FXR2P51116 673 aaKnown RBP eCLIP7.57□□□□□ -1.25e-6■■■□□ 14.9
SRRM1-211ENST00000478890 NCBP3Q53F19 620 aaKnown RBP7.5□□□□□ -1.21
SRRM1-211ENST00000478890 REM2Q8IYK8 340 aaPredicted RBP7.49□□□□□ -1.21
SRRM1-211ENST00000478890 GABBR2O75899 941 aa7.47□□□□□ -1.21
SRRM1-211ENST00000478890 PCDH10Q9P2E7 1040 aa7.47□□□□□ -1.21
SRRM1-211ENST00000478890 POTEMA6NI47 508 aa7.46□□□□□ -1.22
SRRM1-211ENST00000478890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.45□□□□□ -1.22
SRRM1-211ENST00000478890 HNRNPUL2Q1KMD3 747 aaKnown RBP7.45□□□□□ -1.22
SRRM1-211ENST00000478890 PITPNM1O00562 1244 aa7.42□□□□□ -1.22
SRRM1-211ENST00000478890 POTEGQ6S5H5 508 aa7.4□□□□□ -1.22
SRRM1-211ENST00000478890 C19orf67A6NJJ6 358 aa7.36□□□□□ -1.23
SRRM1-211ENST00000478890 SAMD1Q6SPF0 538 aaPredicted RBP7.34□□□□□ -1.23
SRRM1-211ENST00000478890 POLA2Q14181 598 aa7.33□□□□□ -1.24
SRRM1-211ENST00000478890 NPM3O75607 178 aaKnown RBP7.31□□□□□ -1.24
SRRM1-211ENST00000478890 POTEIP0CG38 1075 aa7.27□□□□□ -1.25
SRRM1-211ENST00000478890 PRKAR2AP13861 404 aaKnown RBP7.23□□□□□ -1.25
SRRM1-211ENST00000478890 SLC4A2P04920 1241 aa7.21□□□□□ -1.26
SRRM1-211ENST00000478890 ZBTB12Q9Y330 459 aaPredicted RBP7.21□□□□□ -1.26
SRRM1-211ENST00000478890 OTUD5Q96G74 571 aa7.2□□□□□ -1.26
SRRM1-211ENST00000478890 CLCN6P51797 869 aa7.15□□□□□ -1.26
SRRM1-211ENST00000478890 OSCARQ8IYS5 282 aa7.12□□□□□ -1.27
SRRM1-211ENST00000478890 DCBLD2Q96PD2 775 aa7.11□□□□□ -1.27
SRRM1-211ENST00000478890 POTEB2H3BUK9 544 aa7□□□□□ -1.29
SRRM1-211ENST00000478890 SPDYE1Q8NFV5 336 aaPredicted RBP6.98□□□□□ -1.29
SRRM1-211ENST00000478890 CLEC11AQ9Y240 323 aa6.97□□□□□ -1.29
SRRM1-211ENST00000478890 CD44P16070 742 aaKnown RBP6.96□□□□□ -1.3
SRRM1-211ENST00000478890 LCE2DQ5TA82 110 aaPredicted RBP6.96□□□□□ -1.3
SRRM1-211ENST00000478890 FAM163AQ96GL9 167 aaPredicted RBP6.92□□□□□ -1.3
SRRM1-211ENST00000478890 CDAN1Q8IWY9 1227 aa6.91□□□□□ -1.3
SRRM1-211ENST00000478890 CHADLQ6NUI6 762 aa6.9□□□□□ -1.3
SRRM1-211ENST00000478890 MAMSTRQ6ZN01 415 aa6.87□□□□□ -1.31
SRRM1-211ENST00000478890 SPDYE2BA6NHP3 402 aa6.86□□□□□ -1.31
SRRM1-211ENST00000478890 SPDYE6P0CI01 402 aa6.86□□□□□ -1.31
SRRM1-211ENST00000478890 SPDYE2Q495Y8 402 aa6.86□□□□□ -1.31
SRRM1-211ENST00000478890 MMRN1Q13201 1228 aa6.85□□□□□ -1.31
SRRM1-211ENST00000478890 MYCNP04198 464 aaPredicted RBP6.84□□□□□ -1.31
SRRM1-211ENST00000478890 ZNF579Q8NAF0 562 aaKnown RBP6.82□□□□□ -1.32
SRRM1-211ENST00000478890 SPNS2Q8IVW8 549 aa6.76□□□□□ -1.33
SRRM1-211ENST00000478890 SCUBE2Q9NQ36 999 aa6.76□□□□□ -1.33
SRRM1-211ENST00000478890 GALR2O43603 387 aaPredicted RBP6.75□□□□□ -1.33
SRRM1-211ENST00000478890 FARP1Q9Y4F1 1045 aaPredicted RBP6.75□□□□□ -1.33
SRRM1-211ENST00000478890 PRR29P0C7W0 189 aa6.74□□□□□ -1.33
SRRM1-211ENST00000478890 POTEJP0CG39 1038 aa6.73□□□□□ -1.33
SRRM1-211ENST00000478890 ZRANB1Q9UGI0 708 aa6.7□□□□□ -1.34
SRRM1-211ENST00000478890 METRNQ9UJH8 293 aa6.7□□□□□ -1.34
SRRM1-211ENST00000478890 C7P10643 843 aa6.68□□□□□ -1.34
SRRM1-211ENST00000478890 PELP1Q8IZL8 1130 aaKnown RBP6.68□□□□□ -1.34
SRRM1-211ENST00000478890 SLC39A7Q92504 469 aa6.67□□□□□ -1.34
SRRM1-211ENST00000478890 ATF5Q9Y2D1 282 aaPredicted RBP6.65□□□□□ -1.34
SRRM1-211ENST00000478890 SSUH2Q9Y2M2 353 aa6.63□□□□□ -1.35
SRRM1-211ENST00000478890 ZNF692Q9BU19 519 aaPredicted RBP6.59□□□□□ -1.35
SRRM1-211ENST00000478890 FBLN2P98095 1184 aa6.58□□□□□ -1.36
SRRM1-211ENST00000478890 ASTLQ6HA08 431 aaPredicted RBP6.58□□□□□ -1.36
SRRM1-211ENST00000478890 ST18O60284 1047 aa6.53□□□□□ -1.36
SRRM1-211ENST00000478890 ATMINO43313 823 aaPredicted RBP6.52□□□□□ -1.37
SRRM1-211ENST00000478890 PAK3O75914 559 aaPredicted RBP6.5□□□□□ -1.37
SRRM1-211ENST00000478890 PHF12Q96QT6 1004 aa6.49□□□□□ -1.37
SRRM1-211ENST00000478890 TMEM121BQ9BXQ6 578 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms