RNA–Protein interactions for RNA: ENST00000476953.6

PHF11-208, Transcript of PHD finger protein 11, humanhuman

TSL 5

Gene PHF11, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-208ENST00000476953 NISCHQ9Y2I1 1504 aa50.11■■■■■ 5.61
PHF11-208ENST00000476953 CCDC180Q9P1Z9 1646 aa44.79■■■■■ 4.76
PHF11-208ENST00000476953 ABCC9O60706 1549 aa44.21■■■■■ 4.67
PHF11-208ENST00000476953 RB1CC1Q8TDY2 1594 aa42.28■■■■■ 4.36
PHF11-208ENST00000476953 NACADO15069 1562 aa42.11■■■■■ 4.33
PHF11-208ENST00000476953 DCAF8L2P0C7V8 631 aa41.91■■■■■ 4.3
PHF11-208ENST00000476953 ZCCHC6Q5VYS8 1495 aaKnown RBP41.69■■■■■ 4.26
PHF11-208ENST00000476953 MYO15BQ96JP2 1530 aa41.69■■■■■ 4.26
PHF11-208ENST00000476953 UNC13AQ9UPW8 1703 aa41.59■■■■■ 4.25
PHF11-208ENST00000476953 DCAF1Q9Y4B6 1507 aa41.39■■■■■ 4.22
PHF11-208ENST00000476953 PABPN1Q86U42 306 aaKnown RBP eCLIP41.19■■■■■ 4.18
PHF11-208ENST00000476953 BICRAQ9NZM4 1560 aa41.16■■■■■ 4.18
PHF11-208ENST00000476953 DNAJC5BQ9UF47 199 aa40.97■■■■■ 4.15
PHF11-208ENST00000476953 SCRIBQ14160 1630 aa40.89■■■■■ 4.14
PHF11-208ENST00000476953 SHROOM4Q9ULL8 1493 aa40.47■■■■■ 4.07
PHF11-208ENST00000476953 EIF4G1Q04637 1599 aaKnown RBP40.04■■■■■ 4
PHF11-208ENST00000476953 CC2D2AQ9P2K1 1620 aa40.01■■■■■ 4
PHF11-208ENST00000476953 CECR2Q9BXF3 1484 aa39.72■■■■□ 3.95
PHF11-208ENST00000476953 SMARCA4P51532 1647 aa39.04■■■■□ 3.84
PHF11-208ENST00000476953 ATAD2BQ9ULI0 1458 aa38.86■■■■□ 3.81
PHF11-208ENST00000476953 BAZ1AQ9NRL2 1556 aaPredicted RBP38.84■■■■□ 3.81
PHF11-208ENST00000476953 NCAPD3P42695 1498 aa38.84■■■■□ 3.81
PHF11-208ENST00000476953 SMARCA2P51531 1590 aa38.75■■■■□ 3.79
PHF11-208ENST00000476953 MROH2BQ7Z745 1585 aa38.68■■■■□ 3.78
PHF11-208ENST00000476953 HMGXB3Q12766 1538 aa38.68■■■■□ 3.78
PHF11-208ENST00000476953 PEG3Q9GZU2 1588 aa38.61■■■■□ 3.77
PHF11-208ENST00000476953 BAZ1BQ9UIG0 1483 aaKnown RBP38.5■■■■□ 3.75
PHF11-208ENST00000476953 WIZO95785 1651 aa38.3■■■■□ 3.72
PHF11-208ENST00000476953 NESP48681 1621 aa38.2■■■■□ 3.7
PHF11-208ENST00000476953 ERCC6Q03468 1493 aa38.05■■■■□ 3.68
PHF11-208ENST00000476953 RSF1Q96T23 1441 aaPredicted RBP38.01■■■■□ 3.68
PHF11-208ENST00000476953 LAMC3Q9Y6N6 1575 aa37.93■■■■□ 3.66
PHF11-208ENST00000476953 KIF21AQ7Z4S6 1674 aa37.81■■■■□ 3.64
PHF11-208ENST00000476953 CUX2O14529 1486 aa37.79■■■■□ 3.64
PHF11-208ENST00000476953 TOP2AP11388 1531 aaKnown RBP37.77■■■■□ 3.64
PHF11-208ENST00000476953 THOC2Q8NI27 1593 aaKnown RBP37.74■■■■□ 3.63
PHF11-208ENST00000476953 CADPSQ9ULU8 1353 aa37.67■■■■□ 3.62
PHF11-208ENST00000476953 PDS5BQ9NTI5 1447 aa37.59■■■■□ 3.61
PHF11-208ENST00000476953 CFTRP13569 1480 aa37.4■■■■□ 3.58
PHF11-208ENST00000476953 MRC2Q9UBG0 1479 aa37.33■■■■□ 3.57
PHF11-208ENST00000476953 CCDC88BA6NC98 1476 aa37.31■■■■□ 3.56
PHF11-208ENST00000476953 FANCD2Q9BXW9 1451 aa37.3■■■■□ 3.56
PHF11-208ENST00000476953 CEP164Q9UPV0 1460 aa37.28■■■■□ 3.56
PHF11-208ENST00000476953 PRDM2Q13029 1718 aa37.27■■■■□ 3.56
PHF11-208ENST00000476953 WDR62O43379 1518 aa37.27■■■■□ 3.56
PHF11-208ENST00000476953 DNAJC5Q9H3Z4 198 aa37.08■■■■□ 3.53
PHF11-208ENST00000476953 URB2Q14146 1524 aaKnown RBP37.03■■■■□ 3.52
PHF11-208ENST00000476953 TOPBP1Q92547 1522 aa36.69■■■■□ 3.46
PHF11-208ENST00000476953 SUPT5HO00267 1087 aaKnown RBP36.67■■■■□ 3.46
PHF11-208ENST00000476953 DNMBPQ6XZF7 1577 aa36.61■■■■□ 3.45
PHF11-208ENST00000476953 ABCC8Q09428 1581 aa36.51■■■■□ 3.44
PHF11-208ENST00000476953 IFT140Q96RY7 1462 aa36.49■■■■□ 3.43
PHF11-208ENST00000476953 ZNF608Q9ULD9 1512 aaPredicted RBP36.49■■■■□ 3.43
PHF11-208ENST00000476953 TARBP1Q13395 1621 aaKnown RBP36.38■■■■□ 3.41
PHF11-208ENST00000476953 POLA1P09884 1462 aaPredicted RBP36.36■■■■□ 3.41
PHF11-208ENST00000476953 EIF4G3O43432 1585 aaKnown RBP36.36■■■■□ 3.41
PHF11-208ENST00000476953 CUX1P39880 1505 aa36.31■■■■□ 3.4
PHF11-208ENST00000476953 RAD54L2Q9Y4B4 1467 aa36.24■■■■□ 3.39
PHF11-208ENST00000476953 FGD5Q6ZNL6 1462 aa36.22■■■■□ 3.39
PHF11-208ENST00000476953 AQRO60306 1485 aaKnown RBP eCLIP36.17■■■■□ 3.38
PHF11-208ENST00000476953 SOGA1O94964 1423 aa36.11■■■■□ 3.37
PHF11-208ENST00000476953 WDR97A6NE52 1622 aa36.07■■■■□ 3.36
PHF11-208ENST00000476953 OSCARQ8IYS5 282 aa36.05■■■■□ 3.36
PHF11-208ENST00000476953 CHD1O14646 1710 aa36.04■■■■□ 3.36
PHF11-208ENST00000476953 TDRD9Q8NDG6 1382 aaKnown RBP36.01■■■■□ 3.35
PHF11-208ENST00000476953 BIVM-ERCC5R4GMW8 1640 aa35.91■■■■□ 3.34
PHF11-208ENST00000476953 SYNJ1O43426 1573 aa35.9■■■■□ 3.34
PHF11-208ENST00000476953 TOP2BQ02880 1626 aa35.86■■■■□ 3.33
PHF11-208ENST00000476953 SNAPC4Q5SXM2 1469 aa35.85■■■■□ 3.33
PHF11-208ENST00000476953 PBRM1Q86U86 1689 aa35.84■■■■□ 3.33
PHF11-208ENST00000476953 WRNQ14191 1432 aaPredicted RBP eCLIP35.82■■■■□ 3.32
PHF11-208ENST00000476953 ABCA10Q8WWZ4 1543 aa35.8■■■■□ 3.32
PHF11-208ENST00000476953 ABCA5Q8WWZ7 1642 aa35.79■■■■□ 3.32
PHF11-208ENST00000476953 RIMBP3CA6NJZ7 1639 aa35.77■■■■□ 3.32
PHF11-208ENST00000476953 RIMBP3BA6NNM3 1639 aa35.77■■■■□ 3.32
PHF11-208ENST00000476953 RIMBP3Q9UFD9 1639 aa35.77■■■■□ 3.32
PHF11-208ENST00000476953 GRIN2BQ13224 1484 aa35.75■■■■□ 3.31
PHF11-208ENST00000476953 TRIM41Q8WV44 630 aa35.72■■■■□ 3.31
PHF11-208ENST00000476953 GAPVD1Q14C86 1478 aa35.72■■■■□ 3.31
PHF11-208ENST00000476953 MAGI1Q96QZ7 1491 aaPredicted RBP35.71■■■■□ 3.31
PHF11-208ENST00000476953 FBLN2P98095 1184 aa35.7■■■■□ 3.31
PHF11-208ENST00000476953 ARHGEF11O15085 1522 aa35.66■■■■□ 3.3
PHF11-208ENST00000476953 SYNJ2O15056 1496 aa35.59■■■■□ 3.29
PHF11-208ENST00000476953 CLASP1Q7Z460 1538 aa35.55■■■■□ 3.28
PHF11-208ENST00000476953 CHMP7Q8WUX9 453 aaPredicted RBP35.51■■■■□ 3.28
PHF11-208ENST00000476953 ADAMTS12P58397 1594 aa35.48■■■■□ 3.27
PHF11-208ENST00000476953 ARAP1Q96P48 1450 aa35.36■■■■□ 3.25
PHF11-208ENST00000476953 ERICH3Q5RHP9 1530 aa35.35■■■■□ 3.25
PHF11-208ENST00000476953 GRIN2AQ12879 1464 aa35.34■■■■□ 3.25
PHF11-208ENST00000476953 CEP170Q5SW79 1584 aa35.28■■■■□ 3.24
PHF11-208ENST00000476953 FHAD1B1AJZ9 1412 aa35.26■■■■□ 3.24
PHF11-208ENST00000476953 CYB5RLQ6IPT4 315 aa35.23■■■■□ 3.23
PHF11-208ENST00000476953 NUP160Q12769 1436 aa35.19■■■■□ 3.22
PHF11-208ENST00000476953 ERCC6L2Q5T890 1561 aa35.11■■■■□ 3.21
PHF11-208ENST00000476953 SHROOM2Q13796 1616 aa35.06■■■■□ 3.2
PHF11-208ENST00000476953 KIF27Q86VH2 1401 aa35.04■■■■□ 3.2
PHF11-208ENST00000476953 CUL7Q14999 1698 aa35■■■■□ 3.19
PHF11-208ENST00000476953 IGF1RP08069 1367 aa34.99■■■■□ 3.19
PHF11-208ENST00000476953 RUSC2Q8N2Y8 1516 aa34.97■■■■□ 3.19
PHF11-208ENST00000476953 PRG4Q92954 1404 aaPredicted RBP34.78■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms