RNA–Protein interactions for RNA: ENST00000467763.5

PHF11-207, Transcript of PHD finger protein 11, humanhuman

TSL 5

Gene PHF11, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-207ENST00000467763 NISCHQ9Y2I1 1504 aa48.48■■■■■ 5.35
PHF11-207ENST00000467763 CCDC180Q9P1Z9 1646 aa43.43■■■■■ 4.54
PHF11-207ENST00000467763 ABCC9O60706 1549 aa43.32■■■■■ 4.52
PHF11-207ENST00000467763 RB1CC1Q8TDY2 1594 aa41.32■■■■■ 4.2
PHF11-207ENST00000467763 NACADO15069 1562 aa41.06■■■■■ 4.16
PHF11-207ENST00000467763 DCAF8L2P0C7V8 631 aa41.01■■■■■ 4.16
PHF11-207ENST00000467763 MYO15BQ96JP2 1530 aa40.52■■■■■ 4.08
PHF11-207ENST00000467763 DNAJC5BQ9UF47 199 aa40.46■■■■■ 4.07
PHF11-207ENST00000467763 PABPN1Q86U42 306 aaKnown RBP eCLIP40.38■■■■■ 4.05
PHF11-207ENST00000467763 UNC13AQ9UPW8 1703 aa40.28■■■■■ 4.04
PHF11-207ENST00000467763 ZCCHC6Q5VYS8 1495 aaKnown RBP40.18■■■■■ 4.02
PHF11-207ENST00000467763 DCAF1Q9Y4B6 1507 aa40.05■■■■■ 4
PHF11-207ENST00000467763 BICRAQ9NZM4 1560 aa40.01■■■■□ 3.99
PHF11-207ENST00000467763 SCRIBQ14160 1630 aa39.58■■■■□ 3.93
PHF11-207ENST00000467763 SHROOM4Q9ULL8 1493 aa39.57■■■■□ 3.93
PHF11-207ENST00000467763 CC2D2AQ9P2K1 1620 aa39.11■■■■□ 3.85
PHF11-207ENST00000467763 EIF4G1Q04637 1599 aaKnown RBP39.07■■■■□ 3.84
PHF11-207ENST00000467763 CECR2Q9BXF3 1484 aa39.02■■■■□ 3.84
PHF11-207ENST00000467763 NCAPD3P42695 1498 aa37.9■■■■□ 3.66
PHF11-207ENST00000467763 ATAD2BQ9ULI0 1458 aa37.78■■■■□ 3.64
PHF11-207ENST00000467763 SMARCA4P51532 1647 aa37.77■■■■□ 3.64
PHF11-207ENST00000467763 SMARCA2P51531 1590 aa37.72■■■■□ 3.63
PHF11-207ENST00000467763 BAZ1AQ9NRL2 1556 aaPredicted RBP37.65■■■■□ 3.62
PHF11-207ENST00000467763 HMGXB3Q12766 1538 aa37.61■■■■□ 3.61
PHF11-207ENST00000467763 BAZ1BQ9UIG0 1483 aaKnown RBP37.47■■■■□ 3.59
PHF11-207ENST00000467763 ERCC6Q03468 1493 aa37.45■■■■□ 3.59
PHF11-207ENST00000467763 PEG3Q9GZU2 1588 aa37.39■■■■□ 3.58
PHF11-207ENST00000467763 MROH2BQ7Z745 1585 aa37.33■■■■□ 3.57
PHF11-207ENST00000467763 CUX2O14529 1486 aa37.29■■■■□ 3.56
PHF11-207ENST00000467763 NESP48681 1621 aa37.21■■■■□ 3.55
PHF11-207ENST00000467763 DNAJC5Q9H3Z4 198 aa37.13■■■■□ 3.53
PHF11-207ENST00000467763 LAMC3Q9Y6N6 1575 aa37.02■■■■□ 3.52
PHF11-207ENST00000467763 WIZO95785 1651 aa36.89■■■■□ 3.5
PHF11-207ENST00000467763 PDS5BQ9NTI5 1447 aa36.86■■■■□ 3.49
PHF11-207ENST00000467763 CADPSQ9ULU8 1353 aa36.78■■■■□ 3.48
PHF11-207ENST00000467763 THOC2Q8NI27 1593 aaKnown RBP36.78■■■■□ 3.48
PHF11-207ENST00000467763 KIF21AQ7Z4S6 1674 aa36.73■■■■□ 3.47
PHF11-207ENST00000467763 RSF1Q96T23 1441 aaPredicted RBP36.63■■■■□ 3.45
PHF11-207ENST00000467763 MRC2Q9UBG0 1479 aa36.49■■■■□ 3.43
PHF11-207ENST00000467763 TOP2AP11388 1531 aaKnown RBP36.46■■■■□ 3.43
PHF11-207ENST00000467763 CEP164Q9UPV0 1460 aa36.38■■■■□ 3.41
PHF11-207ENST00000467763 CFTRP13569 1480 aa36.36■■■■□ 3.41
PHF11-207ENST00000467763 WDR62O43379 1518 aa36.35■■■■□ 3.41
PHF11-207ENST00000467763 FANCD2Q9BXW9 1451 aa36.34■■■■□ 3.41
PHF11-207ENST00000467763 CCDC88BA6NC98 1476 aa36.05■■■■□ 3.36
PHF11-207ENST00000467763 URB2Q14146 1524 aaKnown RBP35.98■■■■□ 3.35
PHF11-207ENST00000467763 PRDM2Q13029 1718 aa35.97■■■■□ 3.35
PHF11-207ENST00000467763 OSCARQ8IYS5 282 aa35.7■■■■□ 3.31
PHF11-207ENST00000467763 ABCC8Q09428 1581 aa35.66■■■■□ 3.3
PHF11-207ENST00000467763 TOPBP1Q92547 1522 aa35.66■■■■□ 3.3
PHF11-207ENST00000467763 IFT140Q96RY7 1462 aa35.66■■■■□ 3.3
PHF11-207ENST00000467763 TRIM41Q8WV44 630 aa35.61■■■■□ 3.29
PHF11-207ENST00000467763 DNMBPQ6XZF7 1577 aa35.54■■■■□ 3.28
PHF11-207ENST00000467763 ZNF608Q9ULD9 1512 aaPredicted RBP35.52■■■■□ 3.28
PHF11-207ENST00000467763 EIF4G3O43432 1585 aaKnown RBP35.34■■■■□ 3.25
PHF11-207ENST00000467763 POLA1P09884 1462 aaPredicted RBP35.29■■■■□ 3.24
PHF11-207ENST00000467763 TARBP1Q13395 1621 aaKnown RBP35.28■■■■□ 3.24
PHF11-207ENST00000467763 AQRO60306 1485 aaKnown RBP eCLIP35.26■■■■□ 3.23
PHF11-207ENST00000467763 SUPT5HO00267 1087 aaKnown RBP35.23■■■■□ 3.23
PHF11-207ENST00000467763 SOGA1O94964 1423 aa35.2■■■■□ 3.23
PHF11-207ENST00000467763 RAD54L2Q9Y4B4 1467 aa35.16■■■■□ 3.22
PHF11-207ENST00000467763 FBLN2P98095 1184 aa35.11■■■■□ 3.21
PHF11-207ENST00000467763 FGD5Q6ZNL6 1462 aa35.1■■■■□ 3.21
PHF11-207ENST00000467763 RIMBP3CA6NJZ7 1639 aa35.1■■■■□ 3.21
PHF11-207ENST00000467763 RIMBP3BA6NNM3 1639 aa35.1■■■■□ 3.21
PHF11-207ENST00000467763 RIMBP3Q9UFD9 1639 aa35.1■■■■□ 3.21
PHF11-207ENST00000467763 TDRD9Q8NDG6 1382 aaKnown RBP35.09■■■■□ 3.21
PHF11-207ENST00000467763 CUX1P39880 1505 aa35.06■■■■□ 3.2
PHF11-207ENST00000467763 CHD1O14646 1710 aa35.04■■■■□ 3.2
PHF11-207ENST00000467763 ARHGEF11O15085 1522 aa35.01■■■■□ 3.2
PHF11-207ENST00000467763 WDR97A6NE52 1622 aa34.99■■■■□ 3.19
PHF11-207ENST00000467763 SNAPC4Q5SXM2 1469 aa34.9■■■■□ 3.18
PHF11-207ENST00000467763 CHMP7Q8WUX9 453 aaPredicted RBP34.87■■■■□ 3.17
PHF11-207ENST00000467763 GRIN2BQ13224 1484 aa34.86■■■■□ 3.17
PHF11-207ENST00000467763 MAGI1Q96QZ7 1491 aaPredicted RBP34.84■■■■□ 3.17
PHF11-207ENST00000467763 CYB5RLQ6IPT4 315 aa34.83■■■■□ 3.17
PHF11-207ENST00000467763 GAPVD1Q14C86 1478 aa34.75■■■■□ 3.15
PHF11-207ENST00000467763 SYNJ2O15056 1496 aa34.72■■■■□ 3.15
PHF11-207ENST00000467763 ABCA10Q8WWZ4 1543 aa34.72■■■■□ 3.15
PHF11-207ENST00000467763 SYNJ1O43426 1573 aa34.71■■■■□ 3.15
PHF11-207ENST00000467763 PBRM1Q86U86 1689 aa34.67■■■■□ 3.14
PHF11-207ENST00000467763 ARAP1Q96P48 1450 aa34.66■■■■□ 3.14
PHF11-207ENST00000467763 WRNQ14191 1432 aaPredicted RBP eCLIP34.66■■■■□ 3.14
PHF11-207ENST00000467763 CLASP1Q7Z460 1538 aa34.64■■■■□ 3.14
PHF11-207ENST00000467763 ABCA5Q8WWZ7 1642 aa34.61■■■■□ 3.13
PHF11-207ENST00000467763 TOP2BQ02880 1626 aa34.56■■■■□ 3.12
PHF11-207ENST00000467763 BIVM-ERCC5R4GMW8 1640 aa34.55■■■■□ 3.12
PHF11-207ENST00000467763 TRHP20396 242 aaPredicted RBP34.45■■■■□ 3.11
PHF11-207ENST00000467763 GRIN2AQ12879 1464 aa34.39■■■■□ 3.1
PHF11-207ENST00000467763 ADAMTS12P58397 1594 aa34.35■■■■□ 3.09
PHF11-207ENST00000467763 FHAD1B1AJZ9 1412 aa34.32■■■■□ 3.08
PHF11-207ENST00000467763 ERICH3Q5RHP9 1530 aa34.3■■■■□ 3.08
PHF11-207ENST00000467763 NUP160Q12769 1436 aa34.25■■■■□ 3.07
PHF11-207ENST00000467763 CEP170Q5SW79 1584 aa34.21■■■■□ 3.07
PHF11-207ENST00000467763 ERCC6L2Q5T890 1561 aa34.09■■■■□ 3.05
PHF11-207ENST00000467763 SHROOM2Q13796 1616 aa34.05■■■■□ 3.04
PHF11-207ENST00000467763 JPH4Q96JJ6 628 aa33.98■■■■□ 3.03
PHF11-207ENST00000467763 KIF27Q86VH2 1401 aa33.97■■■■□ 3.03
PHF11-207ENST00000467763 PRG4Q92954 1404 aaPredicted RBP33.96■■■■□ 3.03
PHF11-207ENST00000467763 IGF1RP08069 1367 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms