RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 NISCHQ9Y2I1 1504 aa23.59■■□□□ 1.37
SRRM1-221ENST00000593639 ABCC9O60706 1549 aa21.71■■□□□ 1.07
SRRM1-221ENST00000593639 CCDC180Q9P1Z9 1646 aa21.21■□□□□ 0.99
SRRM1-221ENST00000593639 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
SRRM1-221ENST00000593639 RB1CC1Q8TDY2 1594 aa20.42■□□□□ 0.86
SRRM1-221ENST00000593639 PABPN1Q86U42 306 aaKnown RBP eCLIP20.22■□□□□ 0.83
SRRM1-221ENST00000593639 NACADO15069 1562 aa20.21■□□□□ 0.83
SRRM1-221ENST00000593639 DCAF8L2P0C7V8 631 aa20.13■□□□□ 0.81
SRRM1-221ENST00000593639 BICRAQ9NZM4 1560 aa19.89■□□□□ 0.77
SRRM1-221ENST00000593639 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
SRRM1-221ENST00000593639 MYO15BQ96JP2 1530 aa19.82■□□□□ 0.76
SRRM1-221ENST00000593639 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
SRRM1-221ENST00000593639 SHROOM4Q9ULL8 1493 aa19.55■□□□□ 0.72
SRRM1-221ENST00000593639 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
SRRM1-221ENST00000593639 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
SRRM1-221ENST00000593639 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
SRRM1-221ENST00000593639 EIF4G1Q04637 1599 aaKnown RBP19.43■□□□□ 0.7
SRRM1-221ENST00000593639 SCRIBQ14160 1630 aa19.39■□□□□ 0.69
SRRM1-221ENST00000593639 DNAJC5Q9H3Z4 198 aa19.3■□□□□ 0.68
SRRM1-221ENST00000593639 CUX2O14529 1486 aa18.83■□□□□ 0.6
SRRM1-221ENST00000593639 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
SRRM1-221ENST00000593639 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
SRRM1-221ENST00000593639 ATAD2BQ9ULI0 1458 aa18.62■□□□□ 0.57
SRRM1-221ENST00000593639 NESP48681 1621 aa18.56■□□□□ 0.56
SRRM1-221ENST00000593639 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
SRRM1-221ENST00000593639 SMARCA2P51531 1590 aa18.48■□□□□ 0.55
SRRM1-221ENST00000593639 SMARCA4P51532 1647 aa18.44■□□□□ 0.54
SRRM1-221ENST00000593639 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.53
SRRM1-221ENST00000593639 THOC2Q8NI27 1593 aaKnown RBP18.37■□□□□ 0.53
SRRM1-221ENST00000593639 TRIM41Q8WV44 630 aa18.31■□□□□ 0.52
SRRM1-221ENST00000593639 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
SRRM1-221ENST00000593639 LAMC3Q9Y6N6 1575 aa18.29■□□□□ 0.52
SRRM1-221ENST00000593639 PEG3Q9GZU2 1588 aa18.27■□□□□ 0.52
SRRM1-221ENST00000593639 PDS5BQ9NTI5 1447 aa18.25■□□□□ 0.51
SRRM1-221ENST00000593639 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
SRRM1-221ENST00000593639 KIF21AQ7Z4S6 1674 aa18.17■□□□□ 0.5
SRRM1-221ENST00000593639 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
SRRM1-221ENST00000593639 MRC2Q9UBG0 1479 aa18.12■□□□□ 0.49
SRRM1-221ENST00000593639 WDR62O43379 1518 aa18.07■□□□□ 0.48
SRRM1-221ENST00000593639 CEP164Q9UPV0 1460 aa17.96■□□□□ 0.47
SRRM1-221ENST00000593639 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
SRRM1-221ENST00000593639 FANCD2Q9BXW9 1451 aa17.93■□□□□ 0.46
SRRM1-221ENST00000593639 WIZO95785 1651 aa17.9■□□□□ 0.46
SRRM1-221ENST00000593639 CFTRP13569 1480 aa17.86■□□□□ 0.45
SRRM1-221ENST00000593639 URB2Q14146 1524 aaKnown RBP17.81■□□□□ 0.44
SRRM1-221ENST00000593639 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
SRRM1-221ENST00000593639 RIMBP3CA6NJZ7 1639 aa17.69■□□□□ 0.42
SRRM1-221ENST00000593639 RIMBP3BA6NNM3 1639 aa17.69■□□□□ 0.42
SRRM1-221ENST00000593639 RIMBP3Q9UFD9 1639 aa17.69■□□□□ 0.42
SRRM1-221ENST00000593639 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
SRRM1-221ENST00000593639 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
SRRM1-221ENST00000593639 ARHGEF11O15085 1522 aa17.63■□□□□ 0.41
SRRM1-221ENST00000593639 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
SRRM1-221ENST00000593639 CYB5RLQ6IPT4 315 aa17.58■□□□□ 0.4
SRRM1-221ENST00000593639 TOPBP1Q92547 1522 aa17.53■□□□□ 0.4
SRRM1-221ENST00000593639 CCDC88BA6NC98 1476 aa17.51■□□□□ 0.39
SRRM1-221ENST00000593639 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
SRRM1-221ENST00000593639 EIF4G3O43432 1585 aaKnown RBP17.47■□□□□ 0.39
SRRM1-221ENST00000593639 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.391e-15■■■■□ 19.6
SRRM1-221ENST00000593639 ARAP1Q96P48 1450 aa17.46■□□□□ 0.39
SRRM1-221ENST00000593639 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
SRRM1-221ENST00000593639 PRDM2Q13029 1718 aa17.42■□□□□ 0.38
SRRM1-221ENST00000593639 FBLN2P98095 1184 aa17.42■□□□□ 0.38
SRRM1-221ENST00000593639 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
SRRM1-221ENST00000593639 TARBP1Q13395 1621 aaKnown RBP17.37■□□□□ 0.37
SRRM1-221ENST00000593639 POLA1P09884 1462 aaPredicted RBP17.35■□□□□ 0.37
SRRM1-221ENST00000593639 CHD1O14646 1710 aa17.34■□□□□ 0.37
SRRM1-221ENST00000593639 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
SRRM1-221ENST00000593639 TDRD9Q8NDG6 1382 aaKnown RBP17.31■□□□□ 0.36
SRRM1-221ENST00000593639 SOGA1O94964 1423 aa17.27■□□□□ 0.35
SRRM1-221ENST00000593639 SNAPC4Q5SXM2 1469 aa17.25■□□□□ 0.35
SRRM1-221ENST00000593639 CLASP1Q7Z460 1538 aa17.23■□□□□ 0.35
SRRM1-221ENST00000593639 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
SRRM1-221ENST00000593639 AEBP2Q6ZN18 517 aaPredicted RBP17.21■□□□□ 0.35
SRRM1-221ENST00000593639 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
SRRM1-221ENST00000593639 MAGI1Q96QZ7 1491 aaPredicted RBP17.17■□□□□ 0.34
SRRM1-221ENST00000593639 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
SRRM1-221ENST00000593639 GRIN2BQ13224 1484 aa17.14■□□□□ 0.33
SRRM1-221ENST00000593639 WDR97A6NE52 1622 aa17.13■□□□□ 0.33
SRRM1-221ENST00000593639 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
SRRM1-221ENST00000593639 CUX1P39880 1505 aa17.11■□□□□ 0.33
SRRM1-221ENST00000593639 GAPVD1Q14C86 1478 aa17.1■□□□□ 0.33
SRRM1-221ENST00000593639 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
SRRM1-221ENST00000593639 ABCA10Q8WWZ4 1543 aa16.96■□□□□ 0.3
SRRM1-221ENST00000593639 PBRM1Q86U86 1689 aa16.93■□□□□ 0.3
SRRM1-221ENST00000593639 GRIN2AQ12879 1464 aa16.93■□□□□ 0.3
SRRM1-221ENST00000593639 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
SRRM1-221ENST00000593639 NUP160Q12769 1436 aa16.9■□□□□ 0.3
SRRM1-221ENST00000593639 CEP170Q5SW79 1584 aa16.88■□□□□ 0.29
SRRM1-221ENST00000593639 ADAMTS12P58397 1594 aa16.84■□□□□ 0.29
SRRM1-221ENST00000593639 WRNQ14191 1432 aaPredicted RBP eCLIP16.83■□□□□ 0.28
SRRM1-221ENST00000593639 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
SRRM1-221ENST00000593639 SHROOM2Q13796 1616 aa16.79■□□□□ 0.28
SRRM1-221ENST00000593639 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.27
SRRM1-221ENST00000593639 JPH4Q96JJ6 628 aa16.75■□□□□ 0.27
SRRM1-221ENST00000593639 FAM69CQ0P6D2 419 aa16.73■□□□□ 0.27
SRRM1-221ENST00000593639 ERICH3Q5RHP9 1530 aa16.71■□□□□ 0.27
SRRM1-221ENST00000593639 ABCC10Q5T3U5 1492 aa16.7■□□□□ 0.26
SRRM1-221ENST00000593639 KIF13AQ9H1H9 1805 aa16.7■□□□□ 0.26
SRRM1-221ENST00000593639 TOP2BQ02880 1626 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms