RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 NISCHQ9Y2I1 1504 aa37.55■■■■□ 3.6
DDX41-207ENST00000507900 CCDC180Q9P1Z9 1646 aa32.79■■■□□ 2.84
DDX41-207ENST00000507900 ZCCHC6Q5VYS8 1495 aaKnown RBP31.6■■■□□ 2.65
DDX41-207ENST00000507900 DCAF1Q9Y4B6 1507 aa31.14■■■□□ 2.58
DDX41-207ENST00000507900 MYO15BQ96JP2 1530 aa30.74■■■□□ 2.51
DDX41-207ENST00000507900 ABCC9O60706 1549 aa30.71■■■□□ 2.51
DDX41-207ENST00000507900 DCAF8L2P0C7V8 631 aa30.7■■■□□ 2.5
DDX41-207ENST00000507900 SHROOM4Q9ULL8 1493 aa30.51■■■□□ 2.47
DDX41-207ENST00000507900 NACADO15069 1562 aa30.46■■■□□ 2.47
DDX41-207ENST00000507900 RB1CC1Q8TDY2 1594 aa30.15■■■□□ 2.42
DDX41-207ENST00000507900 SCRIBQ14160 1630 aa30.03■■■□□ 2.4
DDX41-207ENST00000507900 UNC13AQ9UPW8 1703 aa29.61■■■□□ 2.33
DDX41-207ENST00000507900 SUPT5HO00267 1087 aaKnown RBP29.38■■■□□ 2.29
DDX41-207ENST00000507900 BICRAQ9NZM4 1560 aa29.25■■■□□ 2.27
DDX41-207ENST00000507900 RSF1Q96T23 1441 aaPredicted RBP29.13■■■□□ 2.25
DDX41-207ENST00000507900 CECR2Q9BXF3 1484 aa29.1■■■□□ 2.25
DDX41-207ENST00000507900 BAZ1AQ9NRL2 1556 aaPredicted RBP29■■■□□ 2.23
DDX41-207ENST00000507900 MROH2BQ7Z745 1585 aa28.98■■■□□ 2.23
DDX41-207ENST00000507900 PABPN1Q86U42 306 aaKnown RBP eCLIP28.9■■■□□ 2.223e-7■■■■□ 23.8
DDX41-207ENST00000507900 SMARCA4P51532 1647 aa28.86■■■□□ 2.21
DDX41-207ENST00000507900 WIZO95785 1651 aa28.76■■■□□ 2.2
DDX41-207ENST00000507900 PEG3Q9GZU2 1588 aa28.57■■■□□ 2.16
DDX41-207ENST00000507900 TOP2AP11388 1531 aaKnown RBP28.51■■■□□ 2.15
DDX41-207ENST00000507900 SMARCA2P51531 1590 aa28.34■■■□□ 2.13
DDX41-207ENST00000507900 EIF4G1Q04637 1599 aaKnown RBP28.34■■■□□ 2.13
DDX41-207ENST00000507900 ATAD2BQ9ULI0 1458 aa28.32■■■□□ 2.12
DDX41-207ENST00000507900 CHIC1Q5VXU3 224 aa28.28■■■□□ 2.12
DDX41-207ENST00000507900 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
DDX41-207ENST00000507900 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
DDX41-207ENST00000507900 HMGXB3Q12766 1538 aa28.1■■■□□ 2.09
DDX41-207ENST00000507900 NCAPD3P42695 1498 aa28.08■■■□□ 2.09
DDX41-207ENST00000507900 CC2D2AQ9P2K1 1620 aa27.88■■■□□ 2.05
DDX41-207ENST00000507900 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
DDX41-207ENST00000507900 ABCC8Q09428 1581 aa27.58■■■□□ 2.01
DDX41-207ENST00000507900 CFTRP13569 1480 aa27.48■■□□□ 1.99
DDX41-207ENST00000507900 PRDM2Q13029 1718 aa27.48■■□□□ 1.99
DDX41-207ENST00000507900 WRNQ14191 1432 aaPredicted RBP eCLIP27.41■■□□□ 1.98
DDX41-207ENST00000507900 SYNJ1O43426 1573 aa27.33■■□□□ 1.97
DDX41-207ENST00000507900 CADPSQ9ULU8 1353 aa27.32■■□□□ 1.96
DDX41-207ENST00000507900 TOP2BQ02880 1626 aa27.25■■□□□ 1.95
DDX41-207ENST00000507900 BIVM-ERCC5R4GMW8 1640 aa27.25■■□□□ 1.95
DDX41-207ENST00000507900 LAMC3Q9Y6N6 1575 aa27.14■■□□□ 1.93
DDX41-207ENST00000507900 EEA1Q15075 1411 aa27.13■■□□□ 1.93
DDX41-207ENST00000507900 LOC105371045A0A1W2PR82 267 aa27.11■■□□□ 1.93
DDX41-207ENST00000507900 CUX1P39880 1505 aa27.11■■□□□ 1.93
DDX41-207ENST00000507900 FAM9AQ8IZU1 332 aaPredicted RBP27.09■■□□□ 1.93
DDX41-207ENST00000507900 SOGA1O94964 1423 aa27.06■■□□□ 1.92
DDX41-207ENST00000507900 FANCD2Q9BXW9 1451 aa27.02■■□□□ 1.92
DDX41-207ENST00000507900 NESP48681 1621 aa27.01■■□□□ 1.91
DDX41-207ENST00000507900 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
DDX41-207ENST00000507900 RUSC2Q8N2Y8 1516 aa26.96■■□□□ 1.91
DDX41-207ENST00000507900 DNMBPQ6XZF7 1577 aa26.86■■□□□ 1.89
DDX41-207ENST00000507900 CEP164Q9UPV0 1460 aa26.86■■□□□ 1.89
DDX41-207ENST00000507900 CSRNP3Q8WYN3 585 aa26.85■■□□□ 1.89
DDX41-207ENST00000507900 PDS5BQ9NTI5 1447 aa26.85■■□□□ 1.89
DDX41-207ENST00000507900 KIF21BO75037 1637 aa26.81■■□□□ 1.88
DDX41-207ENST00000507900 KIF21AQ7Z4S6 1674 aa26.78■■□□□ 1.88
DDX41-207ENST00000507900 FGD5Q6ZNL6 1462 aa26.77■■□□□ 1.88
DDX41-207ENST00000507900 TOPBP1Q92547 1522 aa26.77■■□□□ 1.88
DDX41-207ENST00000507900 GOLGA3Q08378 1498 aa26.72■■□□□ 1.87
DDX41-207ENST00000507900 KIF27Q86VH2 1401 aa26.71■■□□□ 1.87
DDX41-207ENST00000507900 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.86
DDX41-207ENST00000507900 TNIKQ9UKE5 1360 aa26.65■■□□□ 1.86
DDX41-207ENST00000507900 POLA1P09884 1462 aaPredicted RBP26.64■■□□□ 1.86
DDX41-207ENST00000507900 EHMT2Q96KQ7 1210 aa26.62■■□□□ 1.85
DDX41-207ENST00000507900 ERICH3Q5RHP9 1530 aa26.61■■□□□ 1.85
DDX41-207ENST00000507900 PRXQ9BXM0 1461 aa26.6■■□□□ 1.85
DDX41-207ENST00000507900 CUX2O14529 1486 aa26.59■■□□□ 1.85
DDX41-207ENST00000507900 ABCA10Q8WWZ4 1543 aa26.59■■□□□ 1.85
DDX41-207ENST00000507900 WDR97A6NE52 1622 aa26.56■■□□□ 1.84
DDX41-207ENST00000507900 RAPGEF2Q9Y4G8 1499 aa26.53■■□□□ 1.84
DDX41-207ENST00000507900 MRC2Q9UBG0 1479 aa26.53■■□□□ 1.84
DDX41-207ENST00000507900 RAD54L2Q9Y4B4 1467 aa26.5■■□□□ 1.83
DDX41-207ENST00000507900 CEP162Q5TB80 1403 aa26.5■■□□□ 1.83
DDX41-207ENST00000507900 UBTFP17480 764 aaKnown RBP26.46■■□□□ 1.83
DDX41-207ENST00000507900 IGF1RP08069 1367 aa26.44■■□□□ 1.82
DDX41-207ENST00000507900 WDR62O43379 1518 aa26.43■■□□□ 1.82
DDX41-207ENST00000507900 TARBP1Q13395 1621 aaKnown RBP26.4■■□□□ 1.82
DDX41-207ENST00000507900 ABCA5Q8WWZ7 1642 aa26.4■■□□□ 1.82
DDX41-207ENST00000507900 CUL7Q14999 1698 aa26.34■■□□□ 1.81
DDX41-207ENST00000507900 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.81
DDX41-207ENST00000507900 ERCC6Q03468 1493 aa26.32■■□□□ 1.8
DDX41-207ENST00000507900 CARMIL1Q5VZK9 1371 aa26.3■■□□□ 1.8
DDX41-207ENST00000507900 CLIP1P30622 1438 aa26.26■■□□□ 1.79
DDX41-207ENST00000507900 GAPVD1Q14C86 1478 aa26.25■■□□□ 1.79
DDX41-207ENST00000507900 IFT140Q96RY7 1462 aa26.22■■□□□ 1.79
DDX41-207ENST00000507900 TDRD9Q8NDG6 1382 aaKnown RBP26.19■■□□□ 1.78
DDX41-207ENST00000507900 PBRM1Q86U86 1689 aa26.18■■□□□ 1.78
DDX41-207ENST00000507900 VPS8Q8N3P4 1428 aa26.08■■□□□ 1.77
DDX41-207ENST00000507900 CTTNBP2Q8WZ74 1663 aa26.07■■□□□ 1.76
DDX41-207ENST00000507900 TRIM26Q12899 539 aaPredicted RBP26.04■■□□□ 1.76
DDX41-207ENST00000507900 GRIN2BQ13224 1484 aa26.04■■□□□ 1.76
DDX41-207ENST00000507900 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
DDX41-207ENST00000507900 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.762e-7■■■■■ 51.8
DDX41-207ENST00000507900 ADAMTS12P58397 1594 aa26.03■■□□□ 1.76
DDX41-207ENST00000507900 ZNF608Q9ULD9 1512 aaPredicted RBP26.02■■□□□ 1.76
DDX41-207ENST00000507900 EIF4G3O43432 1585 aaKnown RBP26.02■■□□□ 1.76
DDX41-207ENST00000507900 ARHGAP35Q9NRY4 1499 aa26■■□□□ 1.75
DDX41-207ENST00000507900 FHAD1B1AJZ9 1412 aa25.98■■□□□ 1.75
DDX41-207ENST00000507900 PCGF6Q9BYE7 350 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms