Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 PDPK2P-202ENST00000562415 1191 ntBASIC13.15□□□□□ -0.3
CLCC1Q96S66 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.15□□□□□ -0.3
CLCC1Q96S66 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLCC1Q96S66 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
CLCC1Q96S66 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.15□□□□□ -0.31
CLCC1Q96S66 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 CSPG4P11-201ENST00000560634 4910 ntBASIC13.14□□□□□ -0.31
CLCC1Q96S66 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.14□□□□□ -0.31
CLCC1Q96S66 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 AC092474.2-201ENST00000424288 719 ntBASIC13.14□□□□□ -0.31
CLCC1Q96S66 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 KRT18P58-201ENST00000527480 1120 ntBASIC13.14□□□□□ -0.31
CLCC1Q96S66 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
CLCC1Q96S66 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLCC1Q96S66 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms