Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHC4Q6S5L8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.41■□□□□ 0.38
SHC4Q6S5L8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 AC241585.1-201ENST00000433527 519 ntBASIC17.41■□□□□ 0.38
SHC4Q6S5L8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 AC004790.1-201ENST00000612686 536 ntBASIC17.41■□□□□ 0.38
SHC4Q6S5L8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 KRT18P28-201ENST00000453838 1332 ntBASIC17.41■□□□□ 0.38
SHC4Q6S5L8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHC4Q6S5L8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 CLK3P2-201ENST00000427566 1453 ntBASIC17.4■□□□□ 0.38
SHC4Q6S5L8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 GAPDHP40-201ENST00000505218 1006 ntBASIC17.4■□□□□ 0.38
SHC4Q6S5L8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 AC008738.7-201ENST00000609744 511 ntBASIC17.4■□□□□ 0.38
SHC4Q6S5L8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 AC004840.1-201ENST00000636359 365 ntBASIC17.4■□□□□ 0.38
SHC4Q6S5L8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SHC4Q6S5L8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.39■□□□□ 0.38
SHC4Q6S5L8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.39■□□□□ 0.38
SHC4Q6S5L8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHC4Q6S5L8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
SHC4Q6S5L8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.39■□□□□ 0.38
SHC4Q6S5L8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.39■□□□□ 0.37
SHC4Q6S5L8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 AC005089.1-201ENST00000619486 2241 ntBASIC17.39■□□□□ 0.37
SHC4Q6S5L8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms