Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
USP8P40818 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
USP8P40818 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.94■□□□□ 0.3
USP8P40818 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.94■□□□□ 0.3
USP8P40818 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 AC023157.3-201ENST00000619086 2088 ntBASIC16.94■□□□□ 0.3
USP8P40818 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.94■□□□□ 0.3
USP8P40818 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 RPL37AP1-201ENST00000412502 279 ntBASIC16.94■□□□□ 0.3
USP8P40818 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.94■□□□□ 0.3
USP8P40818 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.94■□□□□ 0.3
USP8P40818 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.94■□□□□ 0.3
USP8P40818 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
USP8P40818 AC139530.3-201ENST00000620344 690 ntBASIC16.94■□□□□ 0.3
USP8P40818 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.94■□□□□ 0.3
USP8P40818 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.94■□□□□ 0.3
USP8P40818 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.94■□□□□ 0.3
USP8P40818 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
USP8P40818 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
USP8P40818 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.94■□□□□ 0.3
USP8P40818 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.93■□□□□ 0.3
USP8P40818 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
USP8P40818 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP8P40818 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
USP8P40818 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.93■□□□□ 0.3
USP8P40818 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP8P40818 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.93■□□□□ 0.3
USP8P40818 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
USP8P40818 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.93■□□□□ 0.3
USP8P40818 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 AC136604.1-201ENST00000418535 575 ntBASIC16.93■□□□□ 0.3
USP8P40818 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.93■□□□□ 0.3
USP8P40818 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.93■□□□□ 0.3
USP8P40818 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.93■□□□□ 0.3
USP8P40818 MIR6069-201ENST00000620069 79 ntBASIC16.93■□□□□ 0.3
USP8P40818 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP8P40818 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.93■□□□□ 0.3
USP8P40818 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.93■□□□□ 0.3
USP8P40818 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.93■□□□□ 0.3
USP8P40818 AC007292.2-201ENST00000593524 1812 ntBASIC16.93■□□□□ 0.3
USP8P40818 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
USP8P40818 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
USP8P40818 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.93■□□□□ 0.3
USP8P40818 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.93■□□□□ 0.3
USP8P40818 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP8P40818 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.93■□□□□ 0.3
USP8P40818 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.92■□□□□ 0.3
USP8P40818 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 C18orf15-201ENST00000623680 2534 ntBASIC16.92■□□□□ 0.3
USP8P40818 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
USP8P40818 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP8P40818 AL080243.2-201ENST00000418783 582 ntBASIC16.92■□□□□ 0.3
USP8P40818 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.92■□□□□ 0.3
USP8P40818 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms