Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC004840.1-201ENST00000636359 365 ntBASIC15.64■□□□□ 0.09
LIMK2P53671 AC068587.6-202ENST00000641839 5619 ntBASIC15.64■□□□□ 0.09
LIMK2P53671 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LIMK2P53671 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
LIMK2P53671 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
LIMK2P53671 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
LIMK2P53671 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.64■□□□□ 0.09
LIMK2P53671 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LIMK2P53671 AC007292.2-201ENST00000593524 1812 ntBASIC15.64■□□□□ 0.09
LIMK2P53671 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK2P53671 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.63■□□□□ 0.09
LIMK2P53671 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LIMK2P53671 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK2P53671 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.63■□□□□ 0.09
LIMK2P53671 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LIMK2P53671 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
LIMK2P53671 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK2P53671 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.63■□□□□ 0.09
LIMK2P53671 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK2P53671 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.63■□□□□ 0.09
LIMK2P53671 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.63■□□□□ 0.09
LIMK2P53671 RN7SL618P-201ENST00000477850 296 ntBASIC15.63■□□□□ 0.09
LIMK2P53671 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK2P53671 AL596325.1-201ENST00000563991 1082 ntBASIC15.63■□□□□ 0.09
LIMK2P53671 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.63■□□□□ 0.09
LIMK2P53671 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.63■□□□□ 0.09
LIMK2P53671 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LIMK2P53671 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.63■□□□□ 0.09
LIMK2P53671 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK2P53671 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.63■□□□□ 0.09
LIMK2P53671 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LIMK2P53671 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK2P53671 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LIMK2P53671 FGD5P1-202ENST00000614866 2498 ntBASIC15.62■□□□□ 0.09
LIMK2P53671 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.62■□□□□ 0.09
LIMK2P53671 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.62■□□□□ 0.09
LIMK2P53671 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
LIMK2P53671 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LIMK2P53671 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.62■□□□□ 0.09
LIMK2P53671 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LIMK2P53671 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
LIMK2P53671 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LIMK2P53671 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.62■□□□□ 0.09
LIMK2P53671 NME2P1-201ENST00000426182 414 ntBASIC15.62■□□□□ 0.09
LIMK2P53671 RN7SL692P-201ENST00000464677 288 ntBASIC15.62■□□□□ 0.09
LIMK2P53671 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.62■□□□□ 0.09
LIMK2P53671 AC135586.1-201ENST00000539323 574 ntBASIC15.62■□□□□ 0.09
LIMK2P53671 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.62■□□□□ 0.09
LIMK2P53671 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.62■□□□□ 0.09
LIMK2P53671 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.62■□□□□ 0.09
LIMK2P53671 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
LIMK2P53671 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.62■□□□□ 0.09
LIMK2P53671 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.62■□□□□ 0.09
LIMK2P53671 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.62■□□□□ 0.09
LIMK2P53671 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.62■□□□□ 0.09
LIMK2P53671 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
LIMK2P53671 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms