Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCNN1AP37088 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.04■□□□□ 0.16
SCNN1AP37088 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCNN1AP37088 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCNN1AP37088 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.04■□□□□ 0.16
SCNN1AP37088 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SCNN1AP37088 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCNN1AP37088 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCNN1AP37088 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.03■□□□□ 0.16
SCNN1AP37088 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 KRT8P14-201ENST00000414254 1442 ntBASIC16.03■□□□□ 0.16
SCNN1AP37088 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
SCNN1AP37088 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SCNN1AP37088 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SCNN1AP37088 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SCNN1AP37088 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.03■□□□□ 0.16
SCNN1AP37088 AC114812.1-204ENST00000449669 728 ntBASIC16.03■□□□□ 0.16
SCNN1AP37088 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.03■□□□□ 0.16
SCNN1AP37088 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.03■□□□□ 0.16
SCNN1AP37088 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.03■□□□□ 0.16
SCNN1AP37088 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
SCNN1AP37088 AP005019.2-201ENST00000615104 511 ntBASIC16.03■□□□□ 0.16
SCNN1AP37088 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SCNN1AP37088 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
SCNN1AP37088 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SCNN1AP37088 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SCNN1AP37088 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SCNN1AP37088 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.03■□□□□ 0.16
SCNN1AP37088 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCNN1AP37088 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.03■□□□□ 0.16
SCNN1AP37088 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.03■□□□□ 0.16
SCNN1AP37088 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SCNN1AP37088 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SCNN1AP37088 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SCNN1AP37088 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.02■□□□□ 0.16
SCNN1AP37088 LILRP1-201ENST00000444199 1370 ntBASIC16.02■□□□□ 0.16
SCNN1AP37088 ACE3P-201ENST00000423435 1973 ntBASIC16.02■□□□□ 0.16
SCNN1AP37088 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCNN1AP37088 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.02■□□□□ 0.16
SCNN1AP37088 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SCNN1AP37088 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCNN1AP37088 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.02■□□□□ 0.16
SCNN1AP37088 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SCNN1AP37088 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCNN1AP37088 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCNN1AP37088 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCNN1AP37088 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.02■□□□□ 0.16
SCNN1AP37088 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.02■□□□□ 0.16
SCNN1AP37088 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.02■□□□□ 0.16
SCNN1AP37088 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCNN1AP37088 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
SCNN1AP37088 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.02■□□□□ 0.16
SCNN1AP37088 CLUHP6-201ENST00000580789 941 ntBASIC16.02■□□□□ 0.16
SCNN1AP37088 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SCNN1AP37088 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SCNN1AP37088 AL033527.5-201ENST00000641382 801 ntBASIC16.02■□□□□ 0.16
SCNN1AP37088 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.02■□□□□ 0.16
SCNN1AP37088 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCNN1AP37088 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCNN1AP37088 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SCNN1AP37088 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCNN1AP37088 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCNN1AP37088 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SCNN1AP37088 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
SCNN1AP37088 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.02■□□□□ 0.15
SCNN1AP37088 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCNN1AP37088 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SCNN1AP37088 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCNN1AP37088 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.02■□□□□ 0.15
SCNN1AP37088 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SCNN1AP37088 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.02■□□□□ 0.15
SCNN1AP37088 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCNN1AP37088 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCNN1AP37088 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
SCNN1AP37088 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms