Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.98□□□□□ -0.49
RAB4AP20338 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RAB4AP20338 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.97□□□□□ -0.49
RAB4AP20338 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.97□□□□□ -0.49
RAB4AP20338 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.97□□□□□ -0.49
RAB4AP20338 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RAB4AP20338 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC11.97□□□□□ -0.49
RAB4AP20338 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.97□□□□□ -0.49
RAB4AP20338 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 TP73-AS1-210ENST00000637775 1455 ntBASIC11.97□□□□□ -0.49
RAB4AP20338 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.97□□□□□ -0.49
RAB4AP20338 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.97□□□□□ -0.49
RAB4AP20338 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 AL118506.1-201ENST00000601296 3082 ntBASIC11.97□□□□□ -0.49
RAB4AP20338 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
RAB4AP20338 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.97□□□□□ -0.49
RAB4AP20338 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.97□□□□□ -0.49
RAB4AP20338 SPDYE21P-201ENST00000413323 827 ntBASIC11.97□□□□□ -0.49
RAB4AP20338 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.97□□□□□ -0.49
RAB4AP20338 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.97□□□□□ -0.49
RAB4AP20338 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.97□□□□□ -0.49
RAB4AP20338 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RAB4AP20338 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 AP006294.2-201ENST00000641667 209 ntBASIC11.97□□□□□ -0.49
RAB4AP20338 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC11.97□□□□□ -0.49
RAB4AP20338 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.97□□□□□ -0.49
RAB4AP20338 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 AC027020.2-201ENST00000602585 2389 ntBASIC11.97□□□□□ -0.49
RAB4AP20338 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RAB4AP20338 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.96□□□□□ -0.49
RAB4AP20338 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB4AP20338 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
RAB4AP20338 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB4AP20338 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
RAB4AP20338 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.96□□□□□ -0.49
RAB4AP20338 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB4AP20338 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB4AP20338 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB4AP20338 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
RAB4AP20338 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
RAB4AP20338 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.96□□□□□ -0.49
RAB4AP20338 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB4AP20338 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RAB4AP20338 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB4AP20338 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RAB4AP20338 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.96□□□□□ -0.49
RAB4AP20338 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
RAB4AP20338 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.96□□□□□ -0.49
RAB4AP20338 TSPY5P-201ENST00000426936 936 ntBASIC11.96□□□□□ -0.49
RAB4AP20338 AC117947.1-201ENST00000427448 529 ntBASIC11.96□□□□□ -0.49
RAB4AP20338 SPDYE13P-201ENST00000445314 798 ntBASIC11.96□□□□□ -0.49
RAB4AP20338 VENTXP7-201ENST00000475503 772 ntBASIC11.96□□□□□ -0.49
RAB4AP20338 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC11.96□□□□□ -0.49
RAB4AP20338 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
RAB4AP20338 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RAB4AP20338 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC11.96□□□□□ -0.49
RAB4AP20338 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
RAB4AP20338 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RAB4AP20338 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
RAB4AP20338 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
RAB4AP20338 ALK-205ENST00000618119 4646 ntTSL 5 BASIC11.96□□□□□ -0.5
RAB4AP20338 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
RAB4AP20338 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.96□□□□□ -0.5
RAB4AP20338 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
RAB4AP20338 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.96□□□□□ -0.5
RAB4AP20338 FGD5P1-202ENST00000614866 2498 ntBASIC11.96□□□□□ -0.5
RAB4AP20338 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms