RNA–Protein interactions for RNA: ENST00000618119.4

ALK-205, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 5 BASIC

Gene ALK, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-205ENST00000618119 PELP1Q8IZL8 1130 aaKnown RBP20.95■□□□□ 0.94
ALK-205ENST00000618119 MYT1Q01538 1121 aa20.93■□□□□ 0.94
ALK-205ENST00000618119 TTBK1Q5TCY1 1321 aaPredicted RBP19.43■□□□□ 0.7
ALK-205ENST00000618119 NISCHQ9Y2I1 1504 aa19.2■□□□□ 0.66
ALK-205ENST00000618119 CENPBP07199 599 aaPredicted RBP19.2■□□□□ 0.66
ALK-205ENST00000618119 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
ALK-205ENST00000618119 ERICH6Q7L0X2 663 aa18.97■□□□□ 0.63
ALK-205ENST00000618119 HRCP23327 699 aa18.87■□□□□ 0.61
ALK-205ENST00000618119 ZEB1P37275 1124 aaPredicted RBP18.86■□□□□ 0.61
ALK-205ENST00000618119 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
ALK-205ENST00000618119 SUPT5HO00267 1087 aaKnown RBP18.78■□□□□ 0.6
ALK-205ENST00000618119 CCER1Q8TC90 406 aaPredicted RBP18.72■□□□□ 0.59
ALK-205ENST00000618119 SHROOM4Q9ULL8 1493 aa18.42■□□□□ 0.54
ALK-205ENST00000618119 PPARGC1BQ86YN6 1023 aaKnown RBP18.15■□□□□ 0.5
ALK-205ENST00000618119 YTHDC1Q96MU7 727 aaKnown RBP18.14■□□□□ 0.49
ALK-205ENST00000618119 NEFLP07196 543 aa18.12■□□□□ 0.49
ALK-205ENST00000618119 GTF3C3Q9Y5Q9 886 aa18.09■□□□□ 0.49
ALK-205ENST00000618119 ACIN1Q9UKV3 1341 aaKnown RBP17.96■□□□□ 0.47
ALK-205ENST00000618119 TRIM26Q12899 539 aaPredicted RBP17.91■□□□□ 0.46
ALK-205ENST00000618119 BCL11AQ9H165 835 aa17.9■□□□□ 0.46
ALK-205ENST00000618119 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.46
ALK-205ENST00000618119 RTL5Q5HYW3 569 aaPredicted RBP17.85■□□□□ 0.45
ALK-205ENST00000618119 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
ALK-205ENST00000618119 GLIPR1L2Q4G1C9 344 aa17.76■□□□□ 0.43
ALK-205ENST00000618119 MYT1LQ9UL68 1186 aa17.76■□□□□ 0.43
ALK-205ENST00000618119 DIEXFQ68CQ4 756 aaKnown RBP17.68■□□□□ 0.42
ALK-205ENST00000618119 FAM9AQ8IZU1 332 aaPredicted RBP17.63■□□□□ 0.41
ALK-205ENST00000618119 ANP32EQ9BTT0 268 aa17.61■□□□□ 0.41
ALK-205ENST00000618119 EIF5BO60841 1220 aaKnown RBP17.6■□□□□ 0.41
ALK-205ENST00000618119 APLP2Q06481 763 aa17.59■□□□□ 0.41
ALK-205ENST00000618119 CLSPNQ9HAW4 1339 aa17.53■□□□□ 0.4
ALK-205ENST00000618119 DAXXQ9UER7 740 aaPredicted RBP17.46■□□□□ 0.39
ALK-205ENST00000618119 NEUROD1Q13562 356 aa17.43■□□□□ 0.38
ALK-205ENST00000618119 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
ALK-205ENST00000618119 PRKCSHP14314 528 aaPredicted RBP17.36■□□□□ 0.37
ALK-205ENST00000618119 CDK11AQ9UQ88 783 aaPredicted RBP17.29■□□□□ 0.36
ALK-205ENST00000618119 SLC24A1O60721 1099 aa17.27■□□□□ 0.35
ALK-205ENST00000618119 BCANQ96GW7 911 aa17.21■□□□□ 0.35
ALK-205ENST00000618119 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
ALK-205ENST00000618119 CHIC1Q5VXU3 224 aa17.11■□□□□ 0.33
ALK-205ENST00000618119 RANGAP1P46060 587 aaPredicted RBP17.08■□□□□ 0.33
ALK-205ENST00000618119 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
ALK-205ENST00000618119 ANP32AP39687 249 aaKnown RBP17.03■□□□□ 0.32
ALK-205ENST00000618119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
ALK-205ENST00000618119 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
ALK-205ENST00000618119 CSRNP3Q8WYN3 585 aa16.97■□□□□ 0.31
ALK-205ENST00000618119 NBR1Q14596 966 aa16.9■□□□□ 0.3
ALK-205ENST00000618119 ERICH6BQ5W0A0 696 aa16.89■□□□□ 0.29
ALK-205ENST00000618119 FKBP8Q14318 412 aa16.84■□□□□ 0.29
ALK-205ENST00000618119 DEKP35659 375 aaKnown RBP16.8■□□□□ 0.28
ALK-205ENST00000618119 ATP1B4Q9UN42 357 aaPredicted RBP16.77■□□□□ 0.28
ALK-205ENST00000618119 ZBTB47Q9UFB7 747 aaPredicted RBP16.76■□□□□ 0.27
ALK-205ENST00000618119 RTN4Q9NQC3 1192 aaKnown RBP16.74■□□□□ 0.27
ALK-205ENST00000618119 DCAF1Q9Y4B6 1507 aa16.71■□□□□ 0.26
ALK-205ENST00000618119 TNNT2P45379 298 aaPredicted RBP16.68■□□□□ 0.26
ALK-205ENST00000618119 PODXL2Q9NZ53 605 aa16.66■□□□□ 0.26
ALK-205ENST00000618119 PKNOX2Q96KN3 472 aa16.63■□□□□ 0.25
ALK-205ENST00000618119 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.63■□□□□ 0.25
ALK-205ENST00000618119 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
ALK-205ENST00000618119 NEFMP07197 916 aa16.6■□□□□ 0.25
ALK-205ENST00000618119 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
ALK-205ENST00000618119 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
ALK-205ENST00000618119 SUPT16HQ9Y5B9 1047 aaKnown RBP16.58■□□□□ 0.25
ALK-205ENST00000618119 ANP32CO43423 234 aa16.55■□□□□ 0.24
ALK-205ENST00000618119 CCDC136Q96JN2 1154 aa16.55■□□□□ 0.24
ALK-205ENST00000618119 NPM2Q86SE8 214 aaKnown RBP16.55■□□□□ 0.24
ALK-205ENST00000618119 ANP32BQ92688 251 aaKnown RBP16.54■□□□□ 0.24
ALK-205ENST00000618119 TSHZ2Q9NRE2 1034 aa16.53■□□□□ 0.24
ALK-205ENST00000618119 MIER1Q8N108 512 aa16.51■□□□□ 0.23
ALK-205ENST00000618119 NAP1L5Q96NT1 182 aaPredicted RBP16.5■□□□□ 0.23
ALK-205ENST00000618119 RBM19Q9Y4C8 960 aaKnown RBP16.5■□□□□ 0.23
ALK-205ENST00000618119 CDK11BP21127 795 aaKnown RBP16.5■□□□□ 0.23
ALK-205ENST00000618119 NOP58Q9Y2X3 529 aaKnown RBP16.49■□□□□ 0.23
ALK-205ENST00000618119 CCDC180Q9P1Z9 1646 aa16.48■□□□□ 0.23
ALK-205ENST00000618119 ITGAEP38570 1179 aa16.48■□□□□ 0.23
ALK-205ENST00000618119 PPM1GO15355 546 aaPredicted RBP16.47■□□□□ 0.23
ALK-205ENST00000618119 VSIG10Q8N0Z9 540 aa16.46■□□□□ 0.23
ALK-205ENST00000618119 ANO8Q9HCE9 1232 aaPredicted RBP16.46■□□□□ 0.22
ALK-205ENST00000618119 TRIM44Q96DX7 344 aaPredicted RBP16.43■□□□□ 0.22
ALK-205ENST00000618119 RSPH6AQ9H0K4 717 aa16.42■□□□□ 0.22
ALK-205ENST00000618119 HSP90AA1P07900 732 aaKnown RBP16.4■□□□□ 0.22
ALK-205ENST00000618119 UBE2Q2Q8WVN8 375 aa16.36■□□□□ 0.21
ALK-205ENST00000618119 DDRGK1Q96HY6 314 aa16.31■□□□□ 0.2
ALK-205ENST00000618119 HSP90AA2PQ14568 343 aaPredicted RBP16.29■□□□□ 0.2
ALK-205ENST00000618119 ZNF326Q5BKZ1 582 aaKnown RBP16.29■□□□□ 0.2
ALK-205ENST00000618119 A0A0U1RQG5 324 aaPredicted RBP16.25■□□□□ 0.19
ALK-205ENST00000618119 SALL2Q9Y467 1007 aaPredicted RBP16.21■□□□□ 0.19
ALK-205ENST00000618119 POLR3GLQ9BT43 218 aa16.2■□□□□ 0.18
ALK-205ENST00000618119 HNRNPUQ00839 825 aaKnown RBP eCLIP16.19■□□□□ 0.18
ALK-205ENST00000618119 PNNQ9H307 717 aaKnown RBP16.19■□□□□ 0.18
ALK-205ENST00000618119 ARXQ96QS3 562 aa16.18■□□□□ 0.18
ALK-205ENST00000618119 TRIM52Q96A61 297 aa16.15■□□□□ 0.18
ALK-205ENST00000618119 LAS1LQ9Y4W2 734 aaKnown RBP16.14■□□□□ 0.17
ALK-205ENST00000618119 L1TD1Q5T7N2 865 aaKnown RBP16.14■□□□□ 0.17
ALK-205ENST00000618119 CNGB1Q14028 1251 aaPredicted RBP16.12■□□□□ 0.17
ALK-205ENST00000618119 PPP4R2Q9NY27 417 aa16.11■□□□□ 0.17
ALK-205ENST00000618119 UPF2Q9HAU5 1272 aaKnown RBP16.1■□□□□ 0.17
ALK-205ENST00000618119 FANCIQ9NVI1 1328 aa16.1■□□□□ 0.17
ALK-205ENST00000618119 FAM50AQ14320 339 aaKnown RBP16.09■□□□□ 0.17
ALK-205ENST00000618119 USP35Q9P2H5 1018 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms