Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 AC132872.4-202ENST00000622924 2756 ntBASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 KRT43P-201ENST00000434019 910 ntBASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 CROCCP4-201ENST00000457096 498 ntBASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 RPL13AP25-201ENST00000484130 612 ntBASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 TDH-203ENST00000531764 1110 ntBASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 BRI3BPP1-201ENST00000594224 787 ntBASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 BTNL10-201ENST00000595971 695 ntBASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 HYMAI-201ENST00000635591 3347 ntBASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 RPS2P32-201ENST00000439199 892 ntBASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 AL049840.4-201ENST00000602422 811 ntBASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 INTS4P2-202ENST00000614726 2019 ntBASIC14.13□□□□□ -0.15
NPIPA2E9PIF3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms