Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 REXO1L4P-201ENST00000605109 1937 ntBASIC17.69■□□□□ 0.42
CLIC4Q9Y696 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 AC004461.2-201ENST00000629517 803 ntBASIC17.69■□□□□ 0.42
CLIC4Q9Y696 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.69■□□□□ 0.42
CLIC4Q9Y696 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.68■□□□□ 0.42
CLIC4Q9Y696 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.68■□□□□ 0.42
CLIC4Q9Y696 KRT18P43-201ENST00000469825 1281 ntBASIC17.68■□□□□ 0.42
CLIC4Q9Y696 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 DUX4L27-201ENST00000554796 1261 ntBASIC17.68■□□□□ 0.42
CLIC4Q9Y696 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 SNX18-202ENST00000343017 3140 ntBASIC17.68■□□□□ 0.42
CLIC4Q9Y696 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLIC4Q9Y696 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 TSSK5P-201ENST00000423978 907 ntBASIC17.67■□□□□ 0.42
CLIC4Q9Y696 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 AL158211.3-201ENST00000607385 239 ntBASIC17.67■□□□□ 0.42
CLIC4Q9Y696 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 AC138969.3-201ENST00000546612 1459 ntBASIC17.67■□□□□ 0.42
CLIC4Q9Y696 AC138932.2-201ENST00000548268 1459 ntBASIC17.67■□□□□ 0.42
CLIC4Q9Y696 AC126755.4-201ENST00000549796 1459 ntBASIC17.67■□□□□ 0.42
CLIC4Q9Y696 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLIC4Q9Y696 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms