Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 AC023024.2-201ENST00000623561 1993 ntBASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 SPDYE7P-202ENST00000420373 878 ntBASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 FAM58DP-201ENST00000428076 619 ntBASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 HLA-J-203ENST00000494367 1087 ntBASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 AC025678.2-201ENST00000562061 970 ntBASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 RARRES2P9-201ENST00000565168 469 ntBASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 AC026979.3-201ENST00000607315 403 ntBASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 AP001059.3-201ENST00000619053 235 ntBASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LIN7CQ9NUP9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LIN7CQ9NUP9 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LIN7CQ9NUP9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LIN7CQ9NUP9 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.96□□□□□ -0.34
LIN7CQ9NUP9 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LIN7CQ9NUP9 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LIN7CQ9NUP9 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
LIN7CQ9NUP9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LIN7CQ9NUP9 KRT8P37-201ENST00000451609 1420 ntBASIC12.96□□□□□ -0.34
LIN7CQ9NUP9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.96□□□□□ -0.34
LIN7CQ9NUP9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LIN7CQ9NUP9 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LIN7CQ9NUP9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.96□□□□□ -0.34
LIN7CQ9NUP9 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 AL512356.2-201ENST00000546955 174 ntBASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 LINC00628-201ENST00000628516 1289 ntBASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LIN7CQ9NUP9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 AP3S2-216ENST00000617003 1561 ntBASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms