Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PER3P56645 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.46□□□□□ -0.09
PER3P56645 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PER3P56645 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PER3P56645 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PER3P56645 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.46□□□□□ -0.1
PER3P56645 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.46□□□□□ -0.1
PER3P56645 AC023908.3-201ENST00000564211 3047 ntBASIC14.46□□□□□ -0.1
PER3P56645 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PER3P56645 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PER3P56645 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PER3P56645 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.46□□□□□ -0.1
PER3P56645 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PER3P56645 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.45□□□□□ -0.1
PER3P56645 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PER3P56645 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.45□□□□□ -0.1
PER3P56645 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
PER3P56645 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.45□□□□□ -0.1
PER3P56645 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PER3P56645 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.45□□□□□ -0.1
PER3P56645 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.45□□□□□ -0.1
PER3P56645 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.45□□□□□ -0.1
PER3P56645 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PER3P56645 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.45□□□□□ -0.1
PER3P56645 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.45□□□□□ -0.1
PER3P56645 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PER3P56645 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.45□□□□□ -0.1
PER3P56645 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.45□□□□□ -0.1
PER3P56645 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.45□□□□□ -0.1
PER3P56645 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.45□□□□□ -0.1
PER3P56645 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PER3P56645 TMEM261P1-201ENST00000604899 340 ntBASIC14.45□□□□□ -0.1
PER3P56645 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.45□□□□□ -0.1
PER3P56645 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 AC004461.2-201ENST00000629517 803 ntBASIC14.45□□□□□ -0.1
PER3P56645 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
PER3P56645 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.45□□□□□ -0.1
PER3P56645 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 REXO1L6P-201ENST00000603433 1515 ntBASIC14.45□□□□□ -0.1
PER3P56645 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.45□□□□□ -0.1
PER3P56645 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.45□□□□□ -0.1
PER3P56645 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
PER3P56645 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PER3P56645 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
PER3P56645 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 CICP14-201ENST00000629111 2732 ntBASIC14.44□□□□□ -0.1
PER3P56645 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PER3P56645 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.44□□□□□ -0.1
PER3P56645 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.44□□□□□ -0.1
PER3P56645 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.44□□□□□ -0.1
PER3P56645 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PER3P56645 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PER3P56645 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.44□□□□□ -0.1
PER3P56645 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PER3P56645 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.44□□□□□ -0.1
PER3P56645 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PER3P56645 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.44□□□□□ -0.1
PER3P56645 AL139010.1-201ENST00000454878 894 ntBASIC14.44□□□□□ -0.1
PER3P56645 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PER3P56645 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.44□□□□□ -0.1
PER3P56645 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.44□□□□□ -0.1
PER3P56645 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.44□□□□□ -0.1
PER3P56645 AL365330.1-201ENST00000607459 531 ntBASIC14.44□□□□□ -0.1
PER3P56645 AL033527.5-201ENST00000641382 801 ntBASIC14.44□□□□□ -0.1
PER3P56645 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.44□□□□□ -0.1
PER3P56645 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.44□□□□□ -0.1
PER3P56645 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PER3P56645 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms