Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 AC022532.1-201ENST00000624563 1728 ntBASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 AC114812.1-204ENST00000449669 728 ntBASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 AP005019.2-201ENST00000615104 511 ntBASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HDAC5Q9UQL6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 AC093525.8-201ENST00000624099 1342 ntBASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 INE1-201ENST00000456273 945 ntBASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 RN7SL837P-201ENST00000463010 287 ntBASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 PTP4A1P2-201ENST00000546033 454 ntBASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 PRSS30P-206ENST00000641773 873 ntBASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 AC007787.1-201ENST00000588095 1583 ntBASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.3■□□□□ 0.68
HDAC5Q9UQL6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 NORAD-201ENST00000565493 5339 ntBASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.29■□□□□ 0.68
HDAC5Q9UQL6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms