Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 BX842568.4-201ENST00000421222 227 ntBASIC15.91■□□□□ 0.14
CASC4Q6P4E1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 AC026150.2-201ENST00000564693 1156 ntBASIC15.91■□□□□ 0.14
CASC4Q6P4E1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 MIR6080-201ENST00000617359 66 ntBASIC15.91■□□□□ 0.14
CASC4Q6P4E1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 AGAP7P-201ENST00000582299 2062 ntBASIC15.91■□□□□ 0.14
CASC4Q6P4E1 AGAP14-201ENST00000624701 2060 ntBASIC15.91■□□□□ 0.14
CASC4Q6P4E1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CASC4Q6P4E1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.9■□□□□ 0.14
CASC4Q6P4E1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.9■□□□□ 0.14
CASC4Q6P4E1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CASC4Q6P4E1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASC4Q6P4E1 FO393414.2-201ENST00000405153 598 ntBASIC15.89■□□□□ 0.13
CASC4Q6P4E1 SPDYE14P-201ENST00000442619 822 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms