Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.26□□□□□ -0.13
CDC42P60953 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.26□□□□□ -0.13
CDC42P60953 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.26□□□□□ -0.13
CDC42P60953 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CDC42P60953 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.26□□□□□ -0.13
CDC42P60953 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.26□□□□□ -0.13
CDC42P60953 KRT18P56-201ENST00000507275 550 ntBASIC14.26□□□□□ -0.13
CDC42P60953 AC105233.2-201ENST00000523697 349 ntBASIC14.26□□□□□ -0.13
CDC42P60953 AF228730.5-201ENST00000530288 346 ntBASIC14.26□□□□□ -0.13
CDC42P60953 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.26□□□□□ -0.13
CDC42P60953 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.26□□□□□ -0.13
CDC42P60953 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.26□□□□□ -0.13
CDC42P60953 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.26□□□□□ -0.13
CDC42P60953 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDC42P60953 IFNL4P1-201ENST00000607083 540 ntBASIC14.26□□□□□ -0.13
CDC42P60953 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDC42P60953 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDC42P60953 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.26□□□□□ -0.13
CDC42P60953 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.26□□□□□ -0.13
CDC42P60953 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CDC42P60953 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.26□□□□□ -0.13
CDC42P60953 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42P60953 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CDC42P60953 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.25□□□□□ -0.13
CDC42P60953 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.25□□□□□ -0.13
CDC42P60953 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.25□□□□□ -0.13
CDC42P60953 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CDC42P60953 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 AL136982.4-201ENST00000437689 1740 ntBASIC14.25□□□□□ -0.13
CDC42P60953 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CDC42P60953 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.25□□□□□ -0.13
CDC42P60953 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDC42P60953 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.25□□□□□ -0.13
CDC42P60953 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
CDC42P60953 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CDC42P60953 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.25□□□□□ -0.13
CDC42P60953 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDC42P60953 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 AC015656.1-201ENST00000624209 3578 ntBASIC14.25□□□□□ -0.13
CDC42P60953 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDC42P60953 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.25□□□□□ -0.13
CDC42P60953 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.25□□□□□ -0.13
CDC42P60953 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.25□□□□□ -0.13
CDC42P60953 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.25□□□□□ -0.13
CDC42P60953 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms