Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A6P48664 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A6P48664 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
SLC1A6P48664 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SLC1A6P48664 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A6P48664 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A6P48664 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A6P48664 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC1A6P48664 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A6P48664 AP000845.1-201ENST00000581677 2131 ntBASIC15.31■□□□□ 0.04
SLC1A6P48664 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A6P48664 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A6P48664 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A6P48664 MIR346-201ENST00000362234 95 ntBASIC15.31■□□□□ 0.04
SLC1A6P48664 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SLC1A6P48664 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC1A6P48664 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC1A6P48664 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A6P48664 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC1A6P48664 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC1A6P48664 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC1A6P48664 AP000842.3-202ENST00000569238 1080 ntBASIC15.31■□□□□ 0.04
SLC1A6P48664 AC011467.4-201ENST00000594891 528 ntBASIC15.31■□□□□ 0.04
SLC1A6P48664 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC1A6P48664 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC1A6P48664 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC1A6P48664 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 LINC01230-201ENST00000625222 3017 ntBASIC15.31■□□□□ 0.04
SLC1A6P48664 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC1A6P48664 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SLC1A6P48664 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SLC1A6P48664 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A6P48664 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC1A6P48664 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A6P48664 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A6P48664 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A6P48664 MTHFR-210ENST00000641407 2387 ntBASIC15.31■□□□□ 0.04
SLC1A6P48664 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A6P48664 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SLC1A6P48664 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A6P48664 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A6P48664 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A6P48664 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SLC1A6P48664 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A6P48664 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
SLC1A6P48664 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A6P48664 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A6P48664 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A6P48664 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC1A6P48664 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SLC1A6P48664 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 AC015656.1-201ENST00000624209 3578 ntBASIC15.3■□□□□ 0.04
SLC1A6P48664 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms