Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PTPN6P29350 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
PTPN6P29350 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.76□□□□□ -0.05
PTPN6P29350 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.76□□□□□ -0.05
PTPN6P29350 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.76□□□□□ -0.05
PTPN6P29350 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
PTPN6P29350 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
PTPN6P29350 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PTPN6P29350 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.76□□□□□ -0.05
PTPN6P29350 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
PTPN6P29350 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.76□□□□□ -0.05
PTPN6P29350 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.76□□□□□ -0.05
PTPN6P29350 TARDBPP1-201ENST00000442013 1203 ntBASIC14.76□□□□□ -0.05
PTPN6P29350 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.76□□□□□ -0.05
PTPN6P29350 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.76□□□□□ -0.05
PTPN6P29350 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.76□□□□□ -0.05
PTPN6P29350 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.76□□□□□ -0.05
PTPN6P29350 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.76□□□□□ -0.05
PTPN6P29350 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PTPN6P29350 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PTPN6P29350 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
PTPN6P29350 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.76□□□□□ -0.05
PTPN6P29350 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.76□□□□□ -0.05
PTPN6P29350 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.76□□□□□ -0.05
PTPN6P29350 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.76□□□□□ -0.05
PTPN6P29350 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.76□□□□□ -0.05
PTPN6P29350 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.76□□□□□ -0.05
PTPN6P29350 ACE3P-201ENST00000423435 1973 ntBASIC14.76□□□□□ -0.05
PTPN6P29350 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PTPN6P29350 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.76□□□□□ -0.05
PTPN6P29350 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.76□□□□□ -0.05
PTPN6P29350 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTPN6P29350 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
PTPN6P29350 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PTPN6P29350 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.75□□□□□ -0.05
PTPN6P29350 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PTPN6P29350 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.75□□□□□ -0.05
PTPN6P29350 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.75□□□□□ -0.05
PTPN6P29350 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
PTPN6P29350 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PTPN6P29350 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PTPN6P29350 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.75□□□□□ -0.05
PTPN6P29350 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
PTPN6P29350 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.75□□□□□ -0.05
PTPN6P29350 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.75□□□□□ -0.05
PTPN6P29350 AC074338.1-201ENST00000416825 156 ntBASIC14.75□□□□□ -0.05
PTPN6P29350 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.75□□□□□ -0.05
PTPN6P29350 AC097493.3-201ENST00000509725 367 ntBASIC14.75□□□□□ -0.05
PTPN6P29350 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.75□□□□□ -0.05
PTPN6P29350 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.75□□□□□ -0.05
PTPN6P29350 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.75□□□□□ -0.05
PTPN6P29350 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.75□□□□□ -0.05
PTPN6P29350 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.75□□□□□ -0.05
PTPN6P29350 RN7SL828P-201ENST00000607615 303 ntBASIC14.75□□□□□ -0.05
PTPN6P29350 AC073592.8-201ENST00000624126 511 ntBASIC14.75□□□□□ -0.05
PTPN6P29350 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
PTPN6P29350 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTPN6P29350 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.75□□□□□ -0.05
PTPN6P29350 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PTPN6P29350 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms