Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.9□□□□□ -0.18
SPARCP09486 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.9□□□□□ -0.18
SPARCP09486 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SPARCP09486 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.9□□□□□ -0.18
SPARCP09486 BANF1P1-201ENST00000553684 263 ntBASIC13.9□□□□□ -0.18
SPARCP09486 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.9□□□□□ -0.18
SPARCP09486 MIR3687-2-201ENST00000577708 61 ntBASIC13.9□□□□□ -0.18
SPARCP09486 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.9□□□□□ -0.18
SPARCP09486 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SPARCP09486 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SPARCP09486 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.9□□□□□ -0.18
SPARCP09486 AL671883.3-201ENST00000603274 991 ntBASIC13.9□□□□□ -0.18
SPARCP09486 MIR3687-1-201ENST00000614492 61 ntBASIC13.9□□□□□ -0.18
SPARCP09486 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SPARCP09486 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SPARCP09486 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SPARCP09486 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SPARCP09486 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.9□□□□□ -0.18
SPARCP09486 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SPARCP09486 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SPARCP09486 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.9□□□□□ -0.18
SPARCP09486 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SPARCP09486 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SPARCP09486 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SPARCP09486 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
SPARCP09486 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SPARCP09486 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SPARCP09486 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SPARCP09486 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SPARCP09486 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
SPARCP09486 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.89□□□□□ -0.19
SPARCP09486 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.89□□□□□ -0.19
SPARCP09486 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SPARCP09486 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
SPARCP09486 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SPARCP09486 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SPARCP09486 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SPARCP09486 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.89□□□□□ -0.19
SPARCP09486 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.89□□□□□ -0.19
SPARCP09486 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.89□□□□□ -0.19
SPARCP09486 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.89□□□□□ -0.19
SPARCP09486 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SPARCP09486 AC093520.2-201ENST00000561830 333 ntBASIC13.89□□□□□ -0.19
SPARCP09486 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.89□□□□□ -0.19
SPARCP09486 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.89□□□□□ -0.19
SPARCP09486 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.89□□□□□ -0.19
SPARCP09486 AC010327.4-202ENST00000591484 748 ntBASIC13.89□□□□□ -0.19
SPARCP09486 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.89□□□□□ -0.19
SPARCP09486 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.89□□□□□ -0.19
SPARCP09486 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.89□□□□□ -0.19
SPARCP09486 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.89□□□□□ -0.19
SPARCP09486 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.89□□□□□ -0.19
SPARCP09486 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.89□□□□□ -0.19
SPARCP09486 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.89□□□□□ -0.19
SPARCP09486 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SPARCP09486 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
SPARCP09486 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SPARCP09486 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPARCP09486 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPARCP09486 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPARCP09486 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SPARCP09486 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPARCP09486 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SPARCP09486 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPARCP09486 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms