Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 DUSP8P5-201ENST00000422884 1815 ntBASIC22.36■■□□□ 1.17
PCDHA9Q9Y5H5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA9Q9Y5H5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.35■■□□□ 1.17
PCDHA9Q9Y5H5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA9Q9Y5H5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA9Q9Y5H5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHA9Q9Y5H5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHA9Q9Y5H5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHA9Q9Y5H5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA9Q9Y5H5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHA9Q9Y5H5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA9Q9Y5H5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PCDHA9Q9Y5H5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PCDHA9Q9Y5H5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA9Q9Y5H5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDHA9Q9Y5H5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHA9Q9Y5H5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHA9Q9Y5H5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDHA9Q9Y5H5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHA9Q9Y5H5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHA9Q9Y5H5 AC087393.1-201ENST00000582896 145 ntBASIC22.33■■□□□ 1.17
PCDHA9Q9Y5H5 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHA9Q9Y5H5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
PCDHA9Q9Y5H5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDHA9Q9Y5H5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PCDHA9Q9Y5H5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA9Q9Y5H5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA9Q9Y5H5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA9Q9Y5H5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA9Q9Y5H5 MIR6089-201ENST00000616698 64 ntBASIC22.32■■□□□ 1.16
PCDHA9Q9Y5H5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA9Q9Y5H5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHA9Q9Y5H5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA9Q9Y5H5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PCDHA9Q9Y5H5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA9Q9Y5H5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.31■■□□□ 1.16
PCDHA9Q9Y5H5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA9Q9Y5H5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA9Q9Y5H5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA9Q9Y5H5 FOXO3B-201ENST00000395675 1928 ntBASIC22.3■■□□□ 1.16
PCDHA9Q9Y5H5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.3■■□□□ 1.16
PCDHA9Q9Y5H5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA9Q9Y5H5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHA9Q9Y5H5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.3■■□□□ 1.16
PCDHA9Q9Y5H5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA9Q9Y5H5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
PCDHA9Q9Y5H5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA9Q9Y5H5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHA9Q9Y5H5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHA9Q9Y5H5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDHA9Q9Y5H5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA9Q9Y5H5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
PCDHA9Q9Y5H5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDHA9Q9Y5H5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PCDHA9Q9Y5H5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA9Q9Y5H5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHA9Q9Y5H5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA9Q9Y5H5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHA9Q9Y5H5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 ABCB10P4-201ENST00000566803 2184 ntBASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA9Q9Y5H5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHA9Q9Y5H5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHA9Q9Y5H5 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHA9Q9Y5H5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA9Q9Y5H5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA9Q9Y5H5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA9Q9Y5H5 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHA9Q9Y5H5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA9Q9Y5H5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHA9Q9Y5H5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA9Q9Y5H5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA9Q9Y5H5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PCDHA9Q9Y5H5 DUX4L18-201ENST00000553347 1267 ntBASIC22.25■■□□□ 1.15
PCDHA9Q9Y5H5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PCDHA9Q9Y5H5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA9Q9Y5H5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA9Q9Y5H5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA9Q9Y5H5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA9Q9Y5H5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA9Q9Y5H5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.24■■□□□ 1.15
PCDHA9Q9Y5H5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHA9Q9Y5H5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA9Q9Y5H5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA9Q9Y5H5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA9Q9Y5H5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA9Q9Y5H5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA9Q9Y5H5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA9Q9Y5H5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms