Protein–RNA interactions for Protein: Q9H015

SLC22A4, Solute carrier family 22 member 4, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4Q9H015 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC22A4Q9H015 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC22A4Q9H015 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SLC22A4Q9H015 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC22A4Q9H015 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC22A4Q9H015 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC22A4Q9H015 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC22A4Q9H015 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC22A4Q9H015 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC22A4Q9H015 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC22A4Q9H015 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC22A4Q9H015 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC22A4Q9H015 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 RARRES2P2-201ENST00000394842 485 ntBASIC20.66■□□□□ 0.9
SLC22A4Q9H015 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 AC093536.1-201ENST00000569153 554 ntBASIC20.66■□□□□ 0.9
SLC22A4Q9H015 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 AC141586.4-201ENST00000624558 1573 ntBASIC20.66■□□□□ 0.9
SLC22A4Q9H015 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
SLC22A4Q9H015 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC22A4Q9H015 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC22A4Q9H015 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC22A4Q9H015 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SLC22A4Q9H015 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC22A4Q9H015 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC22A4Q9H015 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SLC22A4Q9H015 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC22A4Q9H015 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC22A4Q9H015 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC22A4Q9H015 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC22A4Q9H015 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SLC22A4Q9H015 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SLC22A4Q9H015 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC22A4Q9H015 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SLC22A4Q9H015 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.64■□□□□ 0.89
SLC22A4Q9H015 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC22A4Q9H015 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC22A4Q9H015 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC22A4Q9H015 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC22A4Q9H015 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SLC22A4Q9H015 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC22A4Q9H015 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC22A4Q9H015 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SLC22A4Q9H015 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.63■□□□□ 0.89
SLC22A4Q9H015 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC22A4Q9H015 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC22A4Q9H015 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC22A4Q9H015 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC22A4Q9H015 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC22A4Q9H015 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SLC22A4Q9H015 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC22A4Q9H015 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SLC22A4Q9H015 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC22A4Q9H015 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC22A4Q9H015 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SLC22A4Q9H015 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC22A4Q9H015 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC22A4Q9H015 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC22A4Q9H015 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC22A4Q9H015 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLC22A4Q9H015 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC22A4Q9H015 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC22A4Q9H015 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLC22A4Q9H015 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC22A4Q9H015 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC22A4Q9H015 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC22A4Q9H015 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC22A4Q9H015 AC026202.3-201ENST00000600805 1127 ntBASIC20.6■□□□□ 0.89
SLC22A4Q9H015 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SLC22A4Q9H015 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SLC22A4Q9H015 C9orf163-202ENST00000624034 2573 ntBASIC20.59■□□□□ 0.89
SLC22A4Q9H015 KRT18P10-201ENST00000388836 1287 ntBASIC20.59■□□□□ 0.89
SLC22A4Q9H015 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC22A4Q9H015 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC22A4Q9H015 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC22A4Q9H015 RAP2CP1-202ENST00000605179 643 ntBASIC20.59■□□□□ 0.89
SLC22A4Q9H015 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms