Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CSNK2A3Q8NEV1 AC141586.4-201ENST00000624558 1573 ntBASIC20.1■□□□□ 0.81
CSNK2A3Q8NEV1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.1■□□□□ 0.81
CSNK2A3Q8NEV1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.1■□□□□ 0.81
CSNK2A3Q8NEV1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.1■□□□□ 0.81
CSNK2A3Q8NEV1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.1■□□□□ 0.81
CSNK2A3Q8NEV1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK2A3Q8NEV1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.1■□□□□ 0.81
CSNK2A3Q8NEV1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK2A3Q8NEV1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 LONRF2P2-201ENST00000439212 571 ntBASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 AC139795.1-202ENST00000500444 432 ntBASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CSNK2A3Q8NEV1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK2A3Q8NEV1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK2A3Q8NEV1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK2A3Q8NEV1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK2A3Q8NEV1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK2A3Q8NEV1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK2A3Q8NEV1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK2A3Q8NEV1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.81
CSNK2A3Q8NEV1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CSNK2A3Q8NEV1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CSNK2A3Q8NEV1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSNK2A3Q8NEV1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.08■□□□□ 0.8
CSNK2A3Q8NEV1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CSNK2A3Q8NEV1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSNK2A3Q8NEV1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK2A3Q8NEV1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK2A3Q8NEV1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK2A3Q8NEV1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK2A3Q8NEV1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK2A3Q8NEV1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CSNK2A3Q8NEV1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK2A3Q8NEV1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK2A3Q8NEV1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK2A3Q8NEV1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK2A3Q8NEV1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK2A3Q8NEV1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.06■□□□□ 0.8
CSNK2A3Q8NEV1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.06■□□□□ 0.8
CSNK2A3Q8NEV1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.06■□□□□ 0.8
CSNK2A3Q8NEV1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK2A3Q8NEV1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.06■□□□□ 0.8
CSNK2A3Q8NEV1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CSNK2A3Q8NEV1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CSNK2A3Q8NEV1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CSNK2A3Q8NEV1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK2A3Q8NEV1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK2A3Q8NEV1 LINC00543-201ENST00000567234 1845 ntBASIC20.05■□□□□ 0.8
CSNK2A3Q8NEV1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.05■□□□□ 0.8
CSNK2A3Q8NEV1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.05■□□□□ 0.8
CSNK2A3Q8NEV1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.05■□□□□ 0.8
CSNK2A3Q8NEV1 AC019171.1-201ENST00000601251 1056 ntBASIC20.05■□□□□ 0.8
CSNK2A3Q8NEV1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CSNK2A3Q8NEV1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CSNK2A3Q8NEV1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
CSNK2A3Q8NEV1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK2A3Q8NEV1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK2A3Q8NEV1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK2A3Q8NEV1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK2A3Q8NEV1 DUX4L18-201ENST00000553347 1267 ntBASIC20.04■□□□□ 0.8
CSNK2A3Q8NEV1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK2A3Q8NEV1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK2A3Q8NEV1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK2A3Q8NEV1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CSNK2A3Q8NEV1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK2A3Q8NEV1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK2A3Q8NEV1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.03■□□□□ 0.8
CSNK2A3Q8NEV1 AC090877.2-201ENST00000558441 1738 ntBASIC20.03■□□□□ 0.8
CSNK2A3Q8NEV1 ATP5G2P3-201ENST00000429083 425 ntBASIC20.03■□□□□ 0.8
CSNK2A3Q8NEV1 AC022616.5-201ENST00000518796 181 ntBASIC20.03■□□□□ 0.8
CSNK2A3Q8NEV1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK2A3Q8NEV1 AC074183.2-201ENST00000623112 922 ntBASIC20.03■□□□□ 0.8
CSNK2A3Q8NEV1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK2A3Q8NEV1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
CSNK2A3Q8NEV1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK2A3Q8NEV1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK2A3Q8NEV1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.02■□□□□ 0.8
CSNK2A3Q8NEV1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK2A3Q8NEV1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK2A3Q8NEV1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK2A3Q8NEV1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CSNK2A3Q8NEV1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CSNK2A3Q8NEV1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK2A3Q8NEV1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CSNK2A3Q8NEV1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CSNK2A3Q8NEV1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms