Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC25Q86WR0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC25Q86WR0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC25Q86WR0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC25Q86WR0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC25Q86WR0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC25Q86WR0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC25Q86WR0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CCDC25Q86WR0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CCDC25Q86WR0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CCDC25Q86WR0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC25Q86WR0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC25Q86WR0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC25Q86WR0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC25Q86WR0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.83■■□□□ 1.41
CCDC25Q86WR0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CCDC25Q86WR0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC25Q86WR0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.83■■□□□ 1.4
CCDC25Q86WR0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC25Q86WR0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC25Q86WR0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC25Q86WR0 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.82■■□□□ 1.4
CCDC25Q86WR0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 AC092296.2-201ENST00000589470 999 ntBASIC23.81■■□□□ 1.4
CCDC25Q86WR0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC25Q86WR0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC25Q86WR0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC25Q86WR0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.79■■□□□ 1.4
CCDC25Q86WR0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC25Q86WR0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC25Q86WR0 RP9P-202ENST00000450133 1212 ntBASIC23.79■■□□□ 1.4
CCDC25Q86WR0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC25Q86WR0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CCDC25Q86WR0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC25Q86WR0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC25Q86WR0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
CCDC25Q86WR0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC25Q86WR0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC25Q86WR0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC25Q86WR0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CCDC25Q86WR0 AC093536.1-201ENST00000569153 554 ntBASIC23.78■■□□□ 1.4
CCDC25Q86WR0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC25Q86WR0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC25Q86WR0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC25Q86WR0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
CCDC25Q86WR0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC25Q86WR0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC25Q86WR0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC25Q86WR0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC25Q86WR0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC25Q86WR0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC25Q86WR0 FOXO3B-201ENST00000395675 1928 ntBASIC23.76■■□□□ 1.39
CCDC25Q86WR0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC25Q86WR0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC25Q86WR0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC25Q86WR0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC25Q86WR0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC25Q86WR0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC25Q86WR0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CCDC25Q86WR0 AC079834.2-201ENST00000609776 1949 ntBASIC23.75■■□□□ 1.39
CCDC25Q86WR0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC25Q86WR0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.75■■□□□ 1.39
CCDC25Q86WR0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC25Q86WR0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC25Q86WR0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC25Q86WR0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CCDC25Q86WR0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC25Q86WR0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC25Q86WR0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC25Q86WR0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.74■■□□□ 1.39
CCDC25Q86WR0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC25Q86WR0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC25Q86WR0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.74■■□□□ 1.39
CCDC25Q86WR0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms