Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC1A3P43003 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC1A3P43003 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.3■■□□□ 1
SLC1A3P43003 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.3■■□□□ 1
SLC1A3P43003 AC019171.1-201ENST00000601251 1056 ntBASIC21.3■■□□□ 1
SLC1A3P43003 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC1A3P43003 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC1A3P43003 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC1A3P43003 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.29■■□□□ 1
SLC1A3P43003 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC1A3P43003 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC1A3P43003 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC1A3P43003 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC1A3P43003 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.29■■□□□ 1
SLC1A3P43003 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.29■■□□□ 1
SLC1A3P43003 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.29■■□□□ 1
SLC1A3P43003 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC1A3P43003 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC1A3P43003 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SLC1A3P43003 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC1A3P43003 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC1A3P43003 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.28■■□□□ 1
SLC1A3P43003 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC1A3P43003 AC012354.3-201ENST00000623734 483 ntBASIC21.28■■□□□ 1
SLC1A3P43003 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC1A3P43003 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.28■■□□□ 1
SLC1A3P43003 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC1A3P43003 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC1A3P43003 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.28■■□□□ 1
SLC1A3P43003 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC1A3P43003 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.27■■□□□ 1
SLC1A3P43003 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC1A3P43003 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SLC1A3P43003 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.27■■□□□ 1
SLC1A3P43003 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.27■■□□□ 1
SLC1A3P43003 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SLC1A3P43003 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC1A3P43003 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A3P43003 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A3P43003 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC1A3P43003 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A3P43003 BHLHE23-202ENST00000612929 1109 ntBASIC21.26■□□□□ 0.99
SLC1A3P43003 AC074183.2-201ENST00000623112 922 ntBASIC21.26■□□□□ 0.99
SLC1A3P43003 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SLC1A3P43003 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SLC1A3P43003 LINC00543-201ENST00000567234 1845 ntBASIC21.26■□□□□ 0.99
SLC1A3P43003 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A3P43003 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SLC1A3P43003 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC1A3P43003 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
SLC1A3P43003 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A3P43003 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC1A3P43003 AC012676.1-201ENST00000574705 1949 ntBASIC21.25■□□□□ 0.99
SLC1A3P43003 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A3P43003 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC1A3P43003 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC1A3P43003 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A3P43003 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC1A3P43003 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SLC1A3P43003 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A3P43003 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SLC1A3P43003 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.24■□□□□ 0.99
SLC1A3P43003 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A3P43003 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A3P43003 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC1A3P43003 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A3P43003 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A3P43003 AC090877.2-201ENST00000558441 1738 ntBASIC21.24■□□□□ 0.99
SLC1A3P43003 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC1A3P43003 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A3P43003 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A3P43003 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A3P43003 AC022616.5-201ENST00000518796 181 ntBASIC21.23■□□□□ 0.99
SLC1A3P43003 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A3P43003 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A3P43003 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A3P43003 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A3P43003 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A3P43003 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC1A3P43003 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC1A3P43003 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC1A3P43003 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A3P43003 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SLC1A3P43003 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC1A3P43003 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A3P43003 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A3P43003 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A3P43003 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SLC1A3P43003 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC1A3P43003 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A3P43003 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A3P43003 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC1A3P43003 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC1A3P43003 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC1A3P43003 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A3P43003 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SLC1A3P43003 HLA-L-211ENST00000482052 1765 ntBASIC21.2■□□□□ 0.99
SLC1A3P43003 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A3P43003 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A3P43003 AC141586.4-201ENST00000624558 1573 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms