Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.35■■□□□ 1.01
NR4A1P22736 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.35■■□□□ 1.01
NR4A1P22736 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NR4A1P22736 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NR4A1P22736 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NR4A1P22736 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NR4A1P22736 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NR4A1P22736 AC004812.2-201ENST00000611079 2094 ntBASIC21.34■■□□□ 1.01
NR4A1P22736 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NR4A1P22736 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NR4A1P22736 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.34■■□□□ 1.01
NR4A1P22736 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NR4A1P22736 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
NR4A1P22736 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.34■■□□□ 1.01
NR4A1P22736 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
NR4A1P22736 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.33■■□□□ 1.01
NR4A1P22736 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NR4A1P22736 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.33■■□□□ 1.01
NR4A1P22736 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
NR4A1P22736 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
NR4A1P22736 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.33■■□□□ 1.01
NR4A1P22736 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
NR4A1P22736 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
NR4A1P22736 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
NR4A1P22736 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
NR4A1P22736 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.32■■□□□ 1
NR4A1P22736 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NR4A1P22736 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.32■■□□□ 1
NR4A1P22736 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NR4A1P22736 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.31■■□□□ 1
NR4A1P22736 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NR4A1P22736 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.31■■□□□ 1
NR4A1P22736 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.31■■□□□ 1
NR4A1P22736 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.31■■□□□ 1
NR4A1P22736 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NR4A1P22736 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.31■■□□□ 1
NR4A1P22736 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NR4A1P22736 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NR4A1P22736 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NR4A1P22736 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NR4A1P22736 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.3■■□□□ 1
NR4A1P22736 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NR4A1P22736 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NR4A1P22736 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NR4A1P22736 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
NR4A1P22736 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.3■■□□□ 1
NR4A1P22736 EP400NL-214ENST00000641289 2402 ntBASIC21.3■■□□□ 1
NR4A1P22736 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.3■■□□□ 1
NR4A1P22736 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.3■■□□□ 1
NR4A1P22736 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NR4A1P22736 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.29■■□□□ 1
NR4A1P22736 AL117328.2-201ENST00000624617 1940 ntBASIC21.29■■□□□ 1
NR4A1P22736 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NR4A1P22736 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NR4A1P22736 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.29■■□□□ 1
NR4A1P22736 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
NR4A1P22736 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.29■■□□□ 1
NR4A1P22736 LINC00565-201ENST00000562710 2331 ntBASIC21.29■■□□□ 1
NR4A1P22736 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NR4A1P22736 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.29■■□□□ 1
NR4A1P22736 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.29■■□□□ 1
NR4A1P22736 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.28■■□□□ 1
NR4A1P22736 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.28■■□□□ 1
NR4A1P22736 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.28■■□□□ 1
NR4A1P22736 SMPD5-203ENST00000639008 1464 ntBASIC21.28■■□□□ 1
NR4A1P22736 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NR4A1P22736 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NR4A1P22736 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NR4A1P22736 ABHD17AP5-201ENST00000580133 923 ntBASIC21.28■■□□□ 1
NR4A1P22736 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.28■■□□□ 1
NR4A1P22736 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
NR4A1P22736 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.28■■□□□ 1
NR4A1P22736 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NR4A1P22736 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.27■■□□□ 1
NR4A1P22736 SLC6A10P-202ENST00000431994 2058 ntBASIC21.27■■□□□ 1
NR4A1P22736 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NR4A1P22736 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NR4A1P22736 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.27■■□□□ 1
NR4A1P22736 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.27■■□□□ 1
NR4A1P22736 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.27■■□□□ 1
NR4A1P22736 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NR4A1P22736 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.27■■□□□ 1
NR4A1P22736 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NR4A1P22736 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.27■■□□□ 1
NR4A1P22736 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NR4A1P22736 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.26■□□□□ 0.99
NR4A1P22736 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.26■□□□□ 0.99
NR4A1P22736 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NR4A1P22736 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.26■□□□□ 0.99
NR4A1P22736 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NR4A1P22736 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NR4A1P22736 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
NR4A1P22736 AC025884.2-201ENST00000553429 711 ntBASIC21.26■□□□□ 0.99
NR4A1P22736 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.26■□□□□ 0.99
NR4A1P22736 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NR4A1P22736 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NR4A1P22736 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NR4A1P22736 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NR4A1P22736 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NR4A1P22736 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms