Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.22■□□□□ 0.67
IGHV3-43DP0DP04 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IGHV3-43DP0DP04 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IGHV3-43DP0DP04 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IGHV3-43DP0DP04 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IGHV3-43DP0DP04 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IGHV3-43DP0DP04 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.21■□□□□ 0.67
IGHV3-43DP0DP04 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.21■□□□□ 0.67
IGHV3-43DP0DP04 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.21■□□□□ 0.67
IGHV3-43DP0DP04 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IGHV3-43DP0DP04 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.21■□□□□ 0.67
IGHV3-43DP0DP04 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IGHV3-43DP0DP04 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IGHV3-43DP0DP04 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
IGHV3-43DP0DP04 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.2■□□□□ 0.66
IGHV3-43DP0DP04 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IGHV3-43DP0DP04 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.2■□□□□ 0.66
IGHV3-43DP0DP04 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IGHV3-43DP0DP04 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.2■□□□□ 0.66
IGHV3-43DP0DP04 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
IGHV3-43DP0DP04 AC004812.2-201ENST00000611079 2094 ntBASIC19.2■□□□□ 0.66
IGHV3-43DP0DP04 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.2■□□□□ 0.66
IGHV3-43DP0DP04 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGHV3-43DP0DP04 AC141586.4-201ENST00000624558 1573 ntBASIC19.19■□□□□ 0.66
IGHV3-43DP0DP04 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGHV3-43DP0DP04 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.19■□□□□ 0.66
IGHV3-43DP0DP04 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGHV3-43DP0DP04 AC139795.1-202ENST00000500444 432 ntBASIC19.19■□□□□ 0.66
IGHV3-43DP0DP04 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGHV3-43DP0DP04 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IGHV3-43DP0DP04 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IGHV3-43DP0DP04 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IGHV3-43DP0DP04 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IGHV3-43DP0DP04 AL592295.1-201ENST00000400984 884 ntBASIC19.18■□□□□ 0.66
IGHV3-43DP0DP04 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.18■□□□□ 0.66
IGHV3-43DP0DP04 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IGHV3-43DP0DP04 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.18■□□□□ 0.66
IGHV3-43DP0DP04 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.18■□□□□ 0.66
IGHV3-43DP0DP04 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
IGHV3-43DP0DP04 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
IGHV3-43DP0DP04 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.17■□□□□ 0.66
IGHV3-43DP0DP04 ABCB10P4-201ENST00000566803 2184 ntBASIC19.17■□□□□ 0.66
IGHV3-43DP0DP04 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IGHV3-43DP0DP04 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.17■□□□□ 0.66
IGHV3-43DP0DP04 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IGHV3-43DP0DP04 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
IGHV3-43DP0DP04 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGHV3-43DP0DP04 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGHV3-43DP0DP04 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGHV3-43DP0DP04 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGHV3-43DP0DP04 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
IGHV3-43DP0DP04 LONRF2P2-201ENST00000439212 571 ntBASIC19.16■□□□□ 0.66
IGHV3-43DP0DP04 BHLHE23-202ENST00000612929 1109 ntBASIC19.16■□□□□ 0.66
IGHV3-43DP0DP04 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
IGHV3-43DP0DP04 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGHV3-43DP0DP04 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
IGHV3-43DP0DP04 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IGHV3-43DP0DP04 AC090877.2-201ENST00000558441 1738 ntBASIC19.15■□□□□ 0.66
IGHV3-43DP0DP04 AC004987.1-201ENST00000428627 508 ntBASIC19.15■□□□□ 0.66
IGHV3-43DP0DP04 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IGHV3-43DP0DP04 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
IGHV3-43DP0DP04 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IGHV3-43DP0DP04 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
IGHV3-43DP0DP04 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
IGHV3-43DP0DP04 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.14■□□□□ 0.66
IGHV3-43DP0DP04 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV3-43DP0DP04 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV3-43DP0DP04 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV3-43DP0DP04 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
IGHV3-43DP0DP04 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV3-43DP0DP04 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV3-43DP0DP04 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV3-43DP0DP04 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.14■□□□□ 0.65
IGHV3-43DP0DP04 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
IGHV3-43DP0DP04 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV3-43DP0DP04 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV3-43DP0DP04 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
IGHV3-43DP0DP04 ATP5G2P3-201ENST00000429083 425 ntBASIC19.13■□□□□ 0.65
IGHV3-43DP0DP04 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IGHV3-43DP0DP04 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.13■□□□□ 0.65
IGHV3-43DP0DP04 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IGHV3-43DP0DP04 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.13■□□□□ 0.65
IGHV3-43DP0DP04 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.13■□□□□ 0.65
IGHV3-43DP0DP04 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-43DP0DP04 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms