Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HLA-DQA2P01906 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.72■□□□□ 0.91
HLA-DQA2P01906 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DQA2P01906 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HLA-DQA2P01906 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DQA2P01906 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DQA2P01906 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DQA2P01906 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DQA2P01906 HLA-L-211ENST00000482052 1765 ntBASIC20.72■□□□□ 0.91
HLA-DQA2P01906 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DQA2P01906 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.71■□□□□ 0.91
HLA-DQA2P01906 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DQA2P01906 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DQA2P01906 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DQA2P01906 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.71■□□□□ 0.91
HLA-DQA2P01906 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DQA2P01906 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DQA2P01906 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DQA2P01906 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-DQA2P01906 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQA2P01906 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQA2P01906 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQA2P01906 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQA2P01906 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQA2P01906 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQA2P01906 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HLA-DQA2P01906 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DQA2P01906 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQA2P01906 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQA2P01906 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQA2P01906 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQA2P01906 RARRES2P2-201ENST00000394842 485 ntBASIC20.68■□□□□ 0.9
HLA-DQA2P01906 RPS2P7-201ENST00000447334 885 ntBASIC20.68■□□□□ 0.9
HLA-DQA2P01906 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HLA-DQA2P01906 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DQA2P01906 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.68■□□□□ 0.9
HLA-DQA2P01906 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HLA-DQA2P01906 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQA2P01906 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQA2P01906 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.67■□□□□ 0.9
HLA-DQA2P01906 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.67■□□□□ 0.9
HLA-DQA2P01906 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DQA2P01906 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HLA-DQA2P01906 AC004812.2-201ENST00000611079 2094 ntBASIC20.66■□□□□ 0.9
HLA-DQA2P01906 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQA2P01906 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQA2P01906 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQA2P01906 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQA2P01906 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DQA2P01906 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQA2P01906 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQA2P01906 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQA2P01906 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DQA2P01906 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA2P01906 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA2P01906 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.65■□□□□ 0.9
HLA-DQA2P01906 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA2P01906 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA2P01906 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.65■□□□□ 0.9
HLA-DQA2P01906 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA2P01906 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA2P01906 SPCS2P3-201ENST00000500401 656 ntBASIC20.65■□□□□ 0.9
HLA-DQA2P01906 MIR6765-201ENST00000614092 87 ntBASIC20.65■□□□□ 0.9
HLA-DQA2P01906 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DQA2P01906 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
HLA-DQA2P01906 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQA2P01906 ABCB10P4-201ENST00000566803 2184 ntBASIC20.64■□□□□ 0.89
HLA-DQA2P01906 HSD17B1P1-201ENST00000590052 955 ntBASIC20.64■□□□□ 0.89
HLA-DQA2P01906 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQA2P01906 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQA2P01906 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.64■□□□□ 0.89
HLA-DQA2P01906 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DQA2P01906 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQA2P01906 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQA2P01906 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.63■□□□□ 0.89
HLA-DQA2P01906 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQA2P01906 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.63■□□□□ 0.89
HLA-DQA2P01906 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQA2P01906 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.63■□□□□ 0.89
HLA-DQA2P01906 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
HLA-DQA2P01906 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.63■□□□□ 0.89
HLA-DQA2P01906 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.63■□□□□ 0.89
HLA-DQA2P01906 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.63■□□□□ 0.89
HLA-DQA2P01906 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQA2P01906 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DQA2P01906 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms